Difference between revisions of "GAPDi nadp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UACGAMDH_CUT UACGAMDH_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GAPDi_nadp GAPDi_nadp] == * direction: ** LEFT-TO-RIGHT * common name: ** Glyceraldehyde-3-phosphat...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/UACGAMDH_CUT UACGAMDH_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GAPDi_nadp GAPDi_nadp] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nad]][c] '''+''' 1.0 [[uacgam]][c] '''=>''' 1.0 [[uacgamo]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[nadph]][c] '''+''' 1.0 [[13dpg]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[g3p]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 UDP-N-acetyl-D-glucosamine[c] '''=>''' 1.0 UDP-2-acetamido-2-deoxy-alpha-D-ribo-hexopyranos-3-ulose[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c]
+
** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 3-Phospho-D-glyceroyl phosphate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 Glyceraldehyde 3-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0102405]]
+
* Gene: [[B471_RS0119330]]
−
** missing_rxn_creator
+
** Source: [[orthology-aferrooxidans]]
−
* [[B471_RS24525]]
+
−
** missing_rxn_creator
+
−
* [[B471_RS0106500]]
+
−
** missing_rxn_creator
+
−
* [[B471_RS0114265]]
+
−
** missing_rxn_creator
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''51''' reactions found over '''220''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 +
** '''20''' reactions found over '''149''' reactions in the full pathway
 +
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
 +
** '''18''' reactions found over '''71''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[manual]]
+
* Category: [[orthology]]
−
** Source: [[manual-missing_rxn_creator]]
+
** Source: [[orthology-aferrooxidans]]
−
*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10296 10296]
 +
* EC Number : 1.2.1.13
 +
* MetaNetX (MNX) Equation : MNXR100041
 +
* KEGG Reaction : R01063
 +
* BioCyc : META:1.2.1.13-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=B471_RS0102405|B471_RS24525|B471_RS0106500|B471_RS0114265}}
+
{{#set: common name=Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating)}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=B471_RS0119330}}
−
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map01110|map01120|map01200|map01230|map00010|map00710|map01130}}
−
{{#set: reconstruction source=manual-missing_rxn_creator}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
+
{{#set: reconstruction source=orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:37, 21 March 2018

Reaction GAPDi_nadp

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 3-Phospho-D-glyceroyl phosphate[c] + 1.0 H+[c] => 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 Phosphate[c] + 1.0 Glyceraldehyde 3-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.2.1.13
  • MetaNetX (MNX) Equation : MNXR100041
  • KEGG Reaction : R01063
  • BioCyc : META:1.2.1.13-RXN




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