Difference between revisions of "ASPTA"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3HAD80 3HAD80] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier-prote...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ASPTA ASPTA] == * direction: ** REVERSIBLE * common name: ** Aspartate transaminase * Synonym(s):...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/3HAD80 3HAD80] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ASPTA ASPTA] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C8:0)
+
** Aspartate transaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[3hoctACP]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[toct2eACP]][c]
+
** 1.0 [[asp__L]][c] '''+''' 1.0 [[akg]][c] '''<=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[oaa]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 (R)-3-Hydroxyoctanoyl-[acyl-carrier protein][c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 Trans-Oct-2-enoyl-[acyl-carrier protein][c]
+
** 1.0 L-Aspartate[c] '''+''' 1.0 2-Oxoglutarate[c] '''<=>''' 1.0 L-Glutamate[c] '''+''' 1.0 Oxaloacetate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[B471_RS0109180]]
 +
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-bsubtilis]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
+
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
−
** '''28''' reactions found over '''67''' reactions in the full pathway
+
** '''13''' reactions found over '''65''' reactions in the full pathway
−
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''43''' reactions found over '''182''' reactions in the full pathway
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
−
** '''54''' reactions found over '''160''' reactions in the full pathway
+
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 +
** '''26''' reactions found over '''80''' reactions in the full pathway
 +
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 +
** '''24''' reactions found over '''135''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''51''' reactions found over '''220''' reactions in the full pathway
 +
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
 +
** '''19''' reactions found over '''149''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00950]]: [http://www.genome.jp/dbget-bin/www_bget?map00950 map00950]
 +
** '''2''' reactions found over '''33''' reactions in the full pathway
 +
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
 +
** '''22''' reactions found over '''93''' reactions in the full pathway
 +
* [[map00360]]: [http://www.genome.jp/dbget-bin/www_bget?map00360 map00360]
 +
** '''7''' reactions found over '''109''' reactions in the full pathway
 +
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
 +
** '''18''' reactions found over '''71''' reactions in the full pathway
 +
* [[map00350]]: [http://www.genome.jp/dbget-bin/www_bget?map00350 map00350]
 +
** '''6''' reactions found over '''102''' reactions in the full pathway
 +
* [[map00960]]: [http://www.genome.jp/dbget-bin/www_bget?map00960 map00960]
 +
** '''4''' reactions found over '''27''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
 +
** '''17''' reactions found over '''59''' reactions in the full pathway
 +
* [[map00401]]: [http://www.genome.jp/dbget-bin/www_bget?map00401 map00401]
 +
** '''3''' reactions found over '''17''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* BioCyc : META:4.2.1.59-RXN
+
* EC Number : 2.6.1.1
−
* MetaNetX (MNX) Equation : MNXR94888
+
* BioCyc : META:ASPAMINOTRANS-RXN
−
* KEGG Reaction : R04537
+
* MetaNetX (MNX) Equation : MNXR96079
−
* EC Number : 2.3.1.-
+
* RHEA:
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21824 21824]
−
{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C8:0)}}
+
* Reactome : REACT_R-ATH-70596
−
{{#set: in pathway=map01100|map00780|map01212|map00061}}
+
* KEGG Reaction : R00355
−
{{#set: reconstruction category=manual}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: common name=Aspartate transaminase}}
 +
{{#set: gene associated=B471_RS0109180}}
 +
{{#set: in pathway=map01100|map00220|map01110|map01120|map01210|map00270|map01200|map00330|map01230|map00950|map00250|map00360|map00710|map00350|map00960|map01130|map00400|map00401}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:37, 21 March 2018

Reaction ASPTA

  • direction:
    • REVERSIBLE
  • common name:
    • Aspartate transaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Aspartate[c] + 1.0 2-Oxoglutarate[c] <=> 1.0 L-Glutamate[c] + 1.0 Oxaloacetate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.6.1.1
  • BioCyc : META:ASPAMINOTRANS-RXN
  • MetaNetX (MNX) Equation : MNXR96079
  • RHEA:
  • Reactome : REACT_R-ATH-70596
  • KEGG Reaction : R00355




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