Difference between revisions of "PYDXNtr"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] == * common_name: ** Lysine biosynthesis * Synonym(s): == Reaction(s) found == ''...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PYDXNtr PYDXNtr] == * direction: ** REVERSIBLE * common name: ** Pyridoxine transport via diffusion...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/PYDXNtr PYDXNtr] ==
* common_name:
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* direction:
** Lysine biosynthesis
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** REVERSIBLE
 +
* common name:
 +
** Pyridoxine transport via diffusion
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''10''' reactions found over '''34''' reactions in the full pathway
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* With identifiers:
* [[ASAD]]
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** 1.0 [[pydxn]][e] '''<=>''' 1.0 [[pydxn]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[B471_RS0100620]]
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** 1.0 Pyridoxine[e] '''<=>''' 1.0 Pyridoxine[c]
** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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== Genes associated with this reaction  ==
*** [[orthology-bsubtilis]]
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== Pathways  ==
*** [[orthology-aferrooxidans]]
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== Reconstruction information  ==
* [[ASPK]]
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* Category: [[manual]]
** 2 associated gene(s):
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** Source: [[manual-reaction_to_add_delete]]
*** [[B471_RS0100615]]
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*** Comment: [[reaction added from literature evidence or biological expertise]]
*** [[B471_RS0107565]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[DAPDC]]
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** 1 associated gene(s):
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*** [[B471_RS0101130]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[DAPE]]
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** 1 associated gene(s):
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*** [[B471_RS0109300]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[HSDy]]
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** 1 associated gene(s):
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*** [[B471_RS23515]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[SDPDS]]
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** 2 associated gene(s):
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*** [[B471_RS0118440]]
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*** [[B471_RS0119375]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[SDPTA]]
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** 1 associated gene(s):
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*** [[B471_RS0117530]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[THDPS]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[UAAGDS]]
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** 2 associated gene(s):
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*** [[B471_RS0102460]]
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*** [[B471_RS0108970]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UGMDDS]]
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** 1 associated gene(s):
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*** [[B471_RS21735]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/AASAD2 AASAD2]
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* [http://bigg.ucsd.edu/universal/reactions/AASAD3 AASAD3]
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* [http://bigg.ucsd.edu/universal/reactions/AASAD3m AASAD3m]
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* [http://bigg.ucsd.edu/universal/reactions/AATA AATA]
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* [http://bigg.ucsd.edu/universal/reactions/ADAPAT ADAPAT]
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* [http://bigg.ucsd.edu/universal/reactions/ARAT ARAT]
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* [http://bigg.ucsd.edu/universal/reactions/ASADH ASADH]
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* [http://bigg.ucsd.edu/universal/reactions/ASPK_1 ASPK_1]
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* [http://bigg.ucsd.edu/universal/reactions/CH2ACH CH2ACH]
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* [http://bigg.ucsd.edu/universal/reactions/CH3ACH CH3ACH]
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* [http://bigg.ucsd.edu/universal/reactions/DAPDA DAPDA]
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* [http://bigg.ucsd.edu/universal/reactions/HICITDm HICITDm]
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* [http://bigg.ucsd.edu/universal/reactions/HSDH HSDH]
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* [http://bigg.ucsd.edu/universal/reactions/HSDxi HSDxi]
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* [http://bigg.ucsd.edu/universal/reactions/LDAPAT LDAPAT]
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* [http://bigg.ucsd.edu/universal/reactions/OXAGm OXAGm]
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* [http://bigg.ucsd.edu/universal/reactions/RH2CD RH2CD]
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* [http://bigg.ucsd.edu/universal/reactions/RH3CD RH3CD]
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* [http://bigg.ucsd.edu/universal/reactions/SACCD1 SACCD1]
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* [http://bigg.ucsd.edu/universal/reactions/SACCD2 SACCD2]
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* [http://bigg.ucsd.edu/universal/reactions/SACCD4m SACCD4m]
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* [http://bigg.ucsd.edu/universal/reactions/THPAT THPAT]
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* [http://bigg.ucsd.edu/universal/reactions/UGLDDS1 UGLDDS1]
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* [http://bigg.ucsd.edu/universal/reactions/UGLDDS2 UGLDDS2]
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== External links  ==
 
== External links  ==
{{#set: common_name=Lysine biosynthesis}}
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* RHEA:
{{#set: reaction found=10}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28470 28470]
{{#set: total reaction=34}}
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* MetaNetX (MNX) Equation : MNXR103364
{{#set: completion rate=29.0}}
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* BioCyc : META:TRANS-RXN0-205
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Pyridoxine transport via diffusion}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=manual-reaction_to_add_delete}}
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{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}

Latest revision as of 16:37, 21 March 2018

Reaction PYDXNtr

  • direction:
    • REVERSIBLE
  • common name:
    • Pyridoxine transport via diffusion
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Pyridoxine[e] <=> 1.0 Pyridoxine[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR103364
  • BioCyc : META:TRANS-RXN0-205