Difference between revisions of "EX s"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212] == * common_name: ** Fatty acid metabolism * Synonym(s): == Reaction(s) found ==...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EX_s EX_s] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With identifiers:...")
 
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/EX_s EX_s] ==
* common_name:
+
* direction:
** Fatty acid metabolism
+
** REVERSIBLE
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''43''' reactions found over '''182''' reactions in the full pathway
+
* With identifiers:
* [[3HAD100]]
+
** 1.0 [[s]][e] '''<=>'''
** 0 associated gene:
+
* With common name(s):
** 1 reconstruction source(s) associated:
+
** 1.0 Sulfur[e] '''<=>'''
*** [[manual-reaction_to_add_delete]]
+
 
* [[3HAD120]]
+
== Genes associated with this reaction  ==
** 0 associated gene:
+
== Pathways  ==
** 1 reconstruction source(s) associated:
+
== Reconstruction information  ==
*** [[manual-reaction_to_add_delete]]
+
* Category: [[manual]]
* [[3HAD140]]
+
** Source: [[manual-missing_rxn_creator]]
** 0 associated gene:
+
*** Comment: [[reaction from orthology templates not found by pantograph]]
** 1 reconstruction source(s) associated:
+
*** [[manual-reaction_to_add_delete]]
+
* [[3HAD160]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[manual-reaction_to_add_delete]]
+
* [[3HAD60]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[manual-reaction_to_add_delete]]
+
* [[3HAD80]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[manual-reaction_to_add_delete]]
+
* [[3OAR100]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109640]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAR120]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109640]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAR140]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109640]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAR160]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109640]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAR60]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109640]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAR80]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109640]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAS100]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109650]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAS120]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109650]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAS140]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109650]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAS160]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109650]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAS60]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109650]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[3OAS80]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109650]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[ACACT1r]]
+
** 1 associated gene(s):
+
*** [[B471_RS0105350]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ACACT2r]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110565]]
+
*** [[B471_RS0115615]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ACACT3r]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110565]]
+
*** [[B471_RS0115615]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ACACT4r]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110565]]
+
*** [[B471_RS0115615]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ACACT7r]]
+
** 2 associated gene(s):
+
*** [[B471_RS0115615]]
+
*** [[B471_RS0110565]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ACCOAC]]
+
** 4 associated gene(s):
+
*** [[B471_RS0108400]]
+
*** [[B471_RS0108915]]
+
*** [[B471_RS0101860]]
+
*** [[B471_RS0108925]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-aferrooxidans]]
+
* [[ACOATA]]
+
** 2 associated gene(s):
+
*** [[B471_RS0109630]]
+
*** [[B471_RS0109645]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[EAR100x]]
+
** 1 associated gene(s):
+
*** [[B471_RS22805]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[EAR120x]]
+
** 1 associated gene(s):
+
*** [[B471_RS22805]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[EAR140x]]
+
** 1 associated gene(s):
+
*** [[B471_RS22805]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[EAR40x]]
+
** 1 associated gene(s):
+
*** [[B471_RS22805]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[EAR40y]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[manual-reaction_to_add_delete]]
+
* [[EAR60x]]
+
** 1 associated gene(s):
+
*** [[B471_RS22805]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[EAR80x]]
+
** 1 associated gene(s):
+
*** [[B471_RS22805]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[ECOAH1]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[manual-reaction_to_add_delete]]
+
* [[ECOAH2]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110785]]
+
*** [[B471_RS0115580]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ECOAH3]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110785]]
+
*** [[B471_RS0115580]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ECOAH4]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110785]]
+
*** [[B471_RS0115580]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ECOAH6]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110785]]
+
*** [[B471_RS0115580]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ECOAH7]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110785]]
+
*** [[B471_RS0115580]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[FACOAL160]]
+
** 2 associated gene(s):
+
*** [[B471_RS22560]]
+
*** [[B471_RS0110780]]
+
** 2 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
*** [[orthology-bsubtilis]]
+
* [[HACD1]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[manual-reaction_to_add_delete]]
+
* [[KAS14]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109650]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[KAS15]]
+
** 1 associated gene(s):
+
*** [[B471_RS0109630]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[MCOATA]]
+
** 2 associated gene(s):
+
*** [[B471_RS0109645]]
+
*** [[B471_RS0109635]]
+
** 2 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
*** [[orthology-aferrooxidans]]
+
== Reaction(s) not found ==
+
* [http://bigg.ucsd.edu/universal/reactions/3HAD100_1 3HAD100_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3HAD120_1 3HAD120_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3HAD140_1 3HAD140_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3HAD160_1 3HAD160_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3HAD40_1 3HAD40_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3HAD60_1 3HAD60_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3HAD80_1 3HAD80_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OACOAR 3OACOAR]
+
* [http://bigg.ucsd.edu/universal/reactions/3OACOAS 3OACOAS]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAR100_1 3OAR100_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAR120_1 3OAR120_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAR140_1 3OAR140_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAR160_1 3OAR160_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAR40_1 3OAR40_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAR60_1 3OAR60_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAR80_1 3OAR80_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAS100_1 3OAS100_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAS120_1 3OAS120_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAS140_1 3OAS140_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAS160_1 3OAS160_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAS60_1 3OAS60_1]
+
* [http://bigg.ucsd.edu/universal/reactions/3OAS80_1 3OAS80_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT1m ACACT1m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT1x ACACT1x]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT2 ACACT2]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT2m ACACT2m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT3 ACACT3]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT3m ACACT3m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT4m ACACT4m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT4p ACACT4p]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT5m ACACT5m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT5p ACACT5p]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT5r ACACT5r]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT6m ACACT6m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT6p ACACT6p]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT6r ACACT6r]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT7m ACACT7m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT7p ACACT7p]
+
* [http://bigg.ucsd.edu/universal/reactions/ACCOACrm ACCOACrm]
+
* [http://bigg.ucsd.edu/universal/reactions/ACCOAhi ACCOAhi]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA100OR ACOA100OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA120OR ACOA120OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA140OR ACOA140OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA160OR ACOA160OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA40OR ACOA40OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA60OR ACOA60OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA80OR ACOA80OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD1f ACOAD1f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD1fm ACOAD1fm]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD2f ACOAD2f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD3f ACOAD3f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD4f ACOAD4f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD5f ACOAD5f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD6f ACOAD6f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD7f ACOAD7f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAR2m ACOAR2m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAR3m ACOAR3m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAR4m ACOAR4m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAR5m ACOAR5m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAR6m ACOAR6m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAR7m ACOAR7m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOATA_1 ACOATA_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOATAm ACOATAm]
+
* [http://bigg.ucsd.edu/universal/reactions/C160CPT1 C160CPT1]
+
* [http://bigg.ucsd.edu/universal/reactions/C160CPT2 C160CPT2]
+
* [http://bigg.ucsd.edu/universal/reactions/C160CPT2rbc C160CPT2rbc]
+
* [http://bigg.ucsd.edu/universal/reactions/COA1819ZD9DS COA1819ZD9DS]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR100x_1 EAR100x_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR100y EAR100y]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR100y_1 EAR100y_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR120x_1 EAR120x_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR120y EAR120y]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR120y_1 EAR120y_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR140x_1 EAR140x_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR140y EAR140y]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR140y_1 EAR140y_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR40x_1 EAR40x_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR40y_1 EAR40y_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR60x_1 EAR60x_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR60y EAR60y]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR60y_1 EAR60y_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR80x_1 EAR80x_1]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR80y EAR80y]
+
* [http://bigg.ucsd.edu/universal/reactions/EAR80y_1 EAR80y_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH1_1 ECOAH1_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH1m ECOAH1m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH1x ECOAH1x]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH2_1 ECOAH2_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH2m ECOAH2m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH3_1 ECOAH3_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH3m ECOAH3m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH4m ECOAH4m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH4p ECOAH4p]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH5 ECOAH5]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH5_1 ECOAH5_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH5m ECOAH5m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH5p ECOAH5p]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH6m ECOAH6m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH6p ECOAH6p]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH7m ECOAH7m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH7p ECOAH7p]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH8 ECOAH8]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH8p ECOAH8p]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAR ECOAR]
+
* [http://bigg.ucsd.edu/universal/reactions/FACOAE160 FACOAE160]
+
* [http://bigg.ucsd.edu/universal/reactions/FACOAL160p FACOAL160p]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD1_1 HACD1_1]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD1i HACD1i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD1m HACD1m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD1x HACD1x]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD2 HACD2]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD2_1 HACD2_1]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD2i HACD2i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD2m HACD2m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD3 HACD3]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD3_1 HACD3_1]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD3i HACD3i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD3m HACD3m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD4 HACD4]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD4i HACD4i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD4m HACD4m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD4p HACD4p]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD5 HACD5]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD5i HACD5i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD5m HACD5m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD5p HACD5p]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD6 HACD6]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD6i HACD6i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD6m HACD6m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD6p HACD6p]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD7 HACD7]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD7i HACD7i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD7m HACD7m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD7p HACD7p]
+
* [http://bigg.ucsd.edu/universal/reactions/KAS14_1 KAS14_1]
+
* [http://bigg.ucsd.edu/universal/reactions/KAT1 KAT1]
+
* [http://bigg.ucsd.edu/universal/reactions/MCOATA_1 MCOATA_1]
+
* [http://bigg.ucsd.edu/universal/reactions/MCOATAm MCOATAm]
+
* [http://bigg.ucsd.edu/universal/reactions/PTE2x PTE2x]
+
 
== External links  ==
 
== External links  ==
{{#set: common_name=Fatty acid metabolism}}
+
{{#set: direction=REVERSIBLE}}
{{#set: reaction found=43}}
+
{{#set: in pathway=}}
{{#set: total reaction=182}}
+
{{#set: reconstruction category=manual}}
{{#set: completion rate=24.0}}
+
{{#set: reconstruction source=manual-missing_rxn_creator}}
 +
{{#set: reconstruction comment=reaction from orthology templates not found by pantograph}}

Latest revision as of 15:37, 21 March 2018

Reaction EX_s

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 s[e] <=>
  • With common name(s):
    • 1.0 Sulfur[e] <=>

Genes associated with this reaction

Pathways

Reconstruction information

External links