Difference between revisions of "URIK1"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00524 map00524] == * common_name: ** Neomycin, kanamycin and gentamicin biosynthesis * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URIK1 URIK1] == * direction: ** LEFT-TO-RIGHT * common name: ** Uridine kinase ATPUridine * Synon...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00524 map00524] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/URIK1 URIK1] ==
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* common_name:
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* direction:
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** Neomycin, kanamycin and gentamicin biosynthesis
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** LEFT-TO-RIGHT
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* common name:
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** Uridine kinase  ATPUridine
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[HEX1]]
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** 1.0 [[uri]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[ump]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[B471_RS0108295]]
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** 1.0 Uridine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 UMP C9H11N2O9P[c]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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== Genes associated with this reaction  ==
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*** [[orthology-bsubtilis]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[B471_RS23885]]
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* [http://bigg.ucsd.edu/universal/reactions/GLUKA GLUKA]
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** Source: [[orthology-cljungdahlii]]
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* [http://bigg.ucsd.edu/universal/reactions/GLUKAh GLUKAh]
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** Source: [[orthology-bsubtilis]]
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== Pathways  ==
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
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** '''68''' reactions found over '''244''' reactions in the full pathway
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
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** '''22''' reactions found over '''72''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-cljungdahlii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: common_name=Neomycin, kanamycin and gentamicin biosynthesis}}
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* RHEA:
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{{#set: reaction found=1}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16825 16825]
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{{#set: total reaction=3}}
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* EC Number : 2.7.1.213
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{{#set: completion rate=33.0}}
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* MetaNetX (MNX) Equation : MNXR105162
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* KEGG Reaction : R00964
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* BioCyc : META:URIDINEKIN-RXN
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Uridine kinase  ATPUridine }}
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{{#set: gene associated=B471_RS23885}}
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{{#set: in pathway=map00240|map01100|map00983}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:37, 21 March 2018

Reaction URIK1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Uridine kinase ATPUridine
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Uridine[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c] + 1.0 UMP C9H11N2O9P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.7.1.213
  • MetaNetX (MNX) Equation : MNXR105162
  • KEGG Reaction : R00964
  • BioCyc : META:URIDINEKIN-RXN




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