Difference between revisions of "ACONT"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SLFAT_CUT SLFAT_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACONT ACONT] == * direction: ** REVERSIBLE * common name: ** Aconitate hydratase * Synonym(s): ==...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/SLFAT_CUT SLFAT_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACONT ACONT] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Aconitate hydratase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][c] '''+''' 1.0 [[so4]][c] '''+''' 1.0 [[adp]][c] '''=>''' 1.0 [[aps]][c] '''+''' 1.0 [[pi]][c]
+
** 1.0 [[cit]][c] '''<=>''' 1.0 [[icit]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 Sulfate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''=>''' 1.0 Adenosine 5'-phosphosulfate[c] '''+''' 1.0 Phosphate[c]
+
** 1.0 Citrate[c] '''<=>''' 1.0 Isocitrate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0113425]]
+
* Gene: [[B471_RS0105965]]
−
** MANUAL
+
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 +
** '''23''' reactions found over '''129''' reactions in the full pathway
 +
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 +
** '''25''' reactions found over '''157''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 +
** '''26''' reactions found over '''80''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''51''' reactions found over '''220''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
 +
** '''10''' reactions found over '''70''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[reaction found from orthology but we fixed reversibility based on biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: gene associated=B471_RS0113425}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10336 10336]
−
{{#set: in pathway=}}
+
* MetaNetX (MNX) Equation : MNXR95384
−
{{#set: reconstruction category=manual}}
+
* KEGG Reaction : R01324
−
{{#set: reconstruction source=reaction found from orthology but we fixed reversibility based on biological expertise}}
+
* EC Number : 4.2.1.3
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Aconitate hydratase}}
 +
{{#set: gene associated=B471_RS0105965}}
 +
{{#set: in pathway=map01100|map00630|map00720|map01120|map01210|map01200|map01230|map01110|map00020|map01130}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:37, 21 March 2018

Reaction ACONT

  • direction:
    • REVERSIBLE
  • common name:
    • Aconitate hydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Citrate[c] <=> 1.0 Isocitrate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR95384
  • KEGG Reaction : R01324
  • EC Number : 4.2.1.3




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