Difference between revisions of "PTRCTA"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640] == * common_name: ** Propanoate metabolism * Synonym(s): == Reaction(s) found ==...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PTRCTA PTRCTA] == * direction: ** LEFT-TO-RIGHT * common name: ** Putrescine Transaminase * Synonym...")
 
Line 1: Line 1:
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PTRCTA PTRCTA] ==
−
* common_name:
+
* direction:
−
** Propanoate metabolism
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** Putrescine Transaminase
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''15''' reactions found over '''143''' reactions in the full pathway
+
* With identifiers:
−
* [[ABTA]]
+
** 1.0 [[ptrc]][c] '''+''' 1.0 [[akg]][c] '''=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[4abutn]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[B471_RS0110025]]
+
** 1.0 Putrescine[c] '''+''' 1.0 2-Oxoglutarate[c] '''=>''' 1.0 L-Glutamate[c] '''+''' 1.0 4-Aminobutanal[c]
−
** 2 reconstruction source(s) associated:
+
 
−
*** [[orthology-cljungdahlii]]
+
== Genes associated with this reaction  ==
−
*** [[orthology-bsubtilis]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[ACACT1r]]
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* Gene: [[B471_RS0110025]]
−
** 1 associated gene(s):
+
** Source: [[orthology-cljungdahlii]]
−
*** [[B471_RS0105350]]
+
== Pathways  ==
−
** 1 reconstruction source(s) associated:
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
*** [[orthology-bsubtilis]]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[ACACT2r]]
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* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
−
** 2 associated gene(s):
+
** '''19''' reactions found over '''149''' reactions in the full pathway
−
*** [[B471_RS0110565]]
+
== Reconstruction information  ==
−
*** [[B471_RS0115615]]
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* Category: [[orthology]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
−
* [[ACACT3r]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0110565]]
+
−
*** [[B471_RS0115615]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[ACACT4r]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0110565]]
+
−
*** [[B471_RS0115615]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[ACACT7r]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0115615]]
+
−
*** [[B471_RS0110565]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[ACCOAC]]
+
−
** 4 associated gene(s):
+
−
*** [[B471_RS0108400]]
+
−
*** [[B471_RS0108915]]
+
−
*** [[B471_RS0101860]]
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−
*** [[B471_RS0108925]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ACS]]
+
−
** 3 associated gene(s):
+
−
*** [[B471_RS0108000]]
+
−
*** [[B471_RS0102585]]
+
−
*** [[B471_RS0101560]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ACS2]]
+
−
** 3 associated gene(s):
+
−
*** [[B471_RS0108000]]
+
−
*** [[B471_RS0101560]]
+
−
*** [[B471_RS0102585]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[ECOAH9ir]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0115580]]
+
−
*** [[B471_RS0110785]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[MACCOAT]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0115615]]
+
−
*** [[B471_RS0110565]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[MCITL2]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101440]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[MCITS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101430]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[PPCOAC]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0108915]]
+
−
*** [[B471_RS0108400]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[SUCOAS]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0108670]]
+
−
*** [[B471_RS0108675]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
== Reaction(s) not found ==
+
−
* [http://bigg.ucsd.edu/universal/reactions/13PPDH 13PPDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/2HBO 2HBO]
+
−
* [http://bigg.ucsd.edu/universal/reactions/3HBCOAHL 3HBCOAHL]
+
−
* [http://bigg.ucsd.edu/universal/reactions/3HBCOAHLm 3HBCOAHLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/3HPPD 3HPPD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/4M2OPLOXRD 4M2OPLOXRD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ABTArm ABTArm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACCT ACACCT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT10m ACACT10m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT1m ACACT1m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT1x ACACT1x]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT2 ACACT2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT2m ACACT2m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT3 ACACT3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT3m ACACT3m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT4m ACACT4m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT4p ACACT4p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT5m ACACT5m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT5p ACACT5p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT5r ACACT5r]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT6m ACACT6m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT6p ACACT6p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT6r ACACT6r]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT7m ACACT7m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT7p ACACT7p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACCOAC_1 ACCOAC_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACCOACrm ACCOACrm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACCOAL ACCOAL]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACCOALm ACCOALm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACCOAhi ACCOAhi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACKr ACKr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACKrh ACKrh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACKrm ACKrm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACSm ACSm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACSp ACSp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ADCim ADCim]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALCD20y ALCD20y]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALCD21_D ALCD21_D]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALCD3ir ALCD3ir]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALR2 ALR2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/APAT2rm APAT2rm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/APATr APATr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/APPTh APPTh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/APPTm APPTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BNORh BNORh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BTCOARx BTCOARx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BUTCT BUTCT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLm C2M26DCOAHLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLx C2M26DCOAHLx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHACOAH DHACOAH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHRT_2mbcoa DHRT_2mbcoa]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHRT_ivcoa DHRT_ivcoa]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ECH_3hivcoa ECH_3hivcoa]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH11p ECOAH11p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12 ECOAH12]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12m ECOAH12m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH9m ECOAH9m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GCC2cm GCC2cm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GCCc GCCc]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GCCcm GCCcm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLYCDx GLYCDx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HIBH HIBH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HXCT HXCT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ITCOAL1m ITCOAL1m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ITCOALm ITCOALm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/KAT1 KAT1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LALDO3 LALDO3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LCARR LCARR]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LCARS LCARS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LCD LCD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LDH_L LDH_L]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LDH_Lm LDH_Lm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LLDHh LLDHh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCD MCD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCDC MCDC]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCDm MCDm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCDp MCDp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCITD MCITD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCITL2m MCITL2m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCITLm MCITLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCITSm MCITSm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCLORi MCLORi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MGSA MGSA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MICITDr MICITDr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMCD MMCD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMCDm MMCDm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMCDp MMCDp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MME MME]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMEm MMEm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMM2 MMM2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMMm MMMm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSAD1 MMSAD1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSAD1m MMSAD1m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSAD2 MMSAD2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSAD3 MMSAD3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSAD3m MMSAD3m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSDH MMSDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMTSAO MMTSAO]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MOD MOD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MOD_3mhtpp MOD_3mhtpp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MOD_3mop MOD_3mop]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MOD_4mop MOD_4mop]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OBTFL OBTFL]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCDOR OCDOR]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PCFPTh PCFPTh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PCFPTm PCFPTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PCPPTh PCPPTh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PCPPTm PCPPTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PDHcr PDHcr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PDHe3hr PDHe3hr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PFL PFL]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PFLACTm PFLACTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PFLh PFLh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PPACOALh PPACOALh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PPACOALm PPACOALm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PPAKr PPAKr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PPCOACm PPCOACm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PPCSCT PPCSCT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PPDD PPDD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PTA2 PTA2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PTAr PTAr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PTArh PTArh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PTArm PTArm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SUCLm SUCLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SUCOAS1m SUCOAS1m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SUCOASm SUCOASm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLm T2M26DCOAHLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLx T2M26DCOAHLx]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Propanoate metabolism}}
+
* RHEA:
−
{{#set: reaction found=15}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23816 23816]
−
{{#set: total reaction=143}}
+
* EC Number : 2.6.1.29
−
{{#set: completion rate=10.0}}
+
* MetaNetX (MNX) Equation : MNXR103337
 +
* KEGG Reaction : R01155
 +
* BioCyc : META:PUTTRANSAM-RXN
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Putrescine Transaminase}}
 +
{{#set: gene associated=B471_RS0110025}}
 +
{{#set: in pathway=map01100|map00330}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:38, 21 March 2018

Reaction PTRCTA

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Putrescine Transaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Putrescine[c] + 1.0 2-Oxoglutarate[c] => 1.0 L-Glutamate[c] + 1.0 4-Aminobutanal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.6.1.29
  • MetaNetX (MNX) Equation : MNXR103337
  • KEGG Reaction : R01155
  • BioCyc : META:PUTTRANSAM-RXN




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=PTRCTA&oldid=7501"