Difference between revisions of "AGPATr BS"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00071 map00071] == * common_name: ** Fatty acid degradation * Synonym(s): == Reaction(s) found ==...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AGPATr_BS AGPATr_BS] == * direction: ** REVERSIBLE * common name: ** 1 acylglycerol 3 phosphate O a...")
 
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[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00071 map00071] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/AGPATr_BS AGPATr_BS] ==
* common_name:
+
* direction:
** Fatty acid degradation
+
** REVERSIBLE
 +
* common name:
 +
** 1 acylglycerol 3 phosphate O acyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''17''' reactions found over '''167''' reactions in the full pathway
+
* With identifiers:
* [[ABUTD]]
+
** 0.07 [[fa11coa]][c] '''+''' 0.03 [[tdcoa]][c] '''+''' 0.05 [[fa6coa]][c] '''+''' 0.01 [[1ag3p_BS]][c] '''+''' 0.17 [[fa12coa]][c] '''+''' 0.01 [[fa1coa]][c] '''+''' 0.2 [[fa3coa]][c] '''+''' 0.1 [[pmtcoa]][c] '''+''' 0.34 [[fa4coa]][c] '''+''' 0.03 [[strcoa]][c] '''<=>''' 0.01 [[12dag3p_BS]][c] '''+''' 1.0 [[coa]][c]
** 2 associated gene(s):
+
* With common name(s):
*** [[B471_RS0119455]]
+
** 0.07 Iso C170 CoA C38H64N7O17P3S1[c] '''+''' 0.03 Tetradecanoyl-CoA (n-C14:0CoA)[c] '''+''' 0.05 Iso C160 CoA C37H62N7O17P3S1[c] '''+''' 0.01 1 Acyl sn glycerol 3 phsophate C1868H3636O700P100[c] '''+''' 0.17 Anteiso C170 CoA C38H64N7O17P3S1[c] '''+''' 0.01 Iso C140 CoA C35H58N7O17P3S1[c] '''+''' 0.2 Iso C150 CoA C36H60N7O17P3S1[c] '''+''' 0.1 Palmitoyl-CoA (n-C16:0CoA)[c] '''+''' 0.34 Anteiso C150 CoA C36H60N7O17P3S1[c] '''+''' 0.03 Stearyl CoA  n C180CoA  C39H66N7O17P3S[c] '''<=>''' 0.01 1 2 diacyl sn glycerol 3 phosphate C3436H6572O800P100[c] '''+''' 1.0 Coenzyme A[c]
*** [[B471_RS0115620]]
+
 
** 1 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
*** [[orthology-bsubtilis]]
+
Genes have been associated with this reaction based on different elements listed below.
* [[ACACT1r]]
+
* Gene: [[B471_RS0101020]]
** 1 associated gene(s):
+
** Source: [[orthology-bsubtilis]]
*** [[B471_RS0105350]]
+
== Pathways  ==
** 1 reconstruction source(s) associated:
+
== Reconstruction information  ==
*** [[orthology-bsubtilis]]
+
* Category: [[orthology]]
* [[ACACT2r]]
+
** Source: [[orthology-bsubtilis]]
** 2 associated gene(s):
+
*** Tool: [[pantograph]]
*** [[B471_RS0110565]]
+
*** [[B471_RS0115615]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ACACT3r]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110565]]
+
*** [[B471_RS0115615]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ACACT4r]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110565]]
+
*** [[B471_RS0115615]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ACACT7r]]
+
** 2 associated gene(s):
+
*** [[B471_RS0115615]]
+
*** [[B471_RS0110565]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ECOAH1]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[manual-reaction_to_add_delete]]
+
* [[ECOAH2]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110785]]
+
*** [[B471_RS0115580]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ECOAH3]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110785]]
+
*** [[B471_RS0115580]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ECOAH4]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110785]]
+
*** [[B471_RS0115580]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ECOAH6]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110785]]
+
*** [[B471_RS0115580]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ECOAH7]]
+
** 2 associated gene(s):
+
*** [[B471_RS0110785]]
+
*** [[B471_RS0115580]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[ECOAH9ir]]
+
** 2 associated gene(s):
+
*** [[B471_RS0115580]]
+
*** [[B471_RS0110785]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
* [[FACOAL160]]
+
** 2 associated gene(s):
+
*** [[B471_RS22560]]
+
*** [[B471_RS0110780]]
+
** 2 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
*** [[orthology-bsubtilis]]
+
* [[FACOAL180]]
+
** 1 associated gene(s):
+
*** [[B471_RS22560]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-cljungdahlii]]
+
* [[HACD1]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[manual-reaction_to_add_delete]]
+
* [[MACCOAT]]
+
** 2 associated gene(s):
+
*** [[B471_RS0115615]]
+
*** [[B471_RS0110565]]
+
** 1 reconstruction source(s) associated:
+
*** [[orthology-bsubtilis]]
+
== Reaction(s) not found ==
+
* [http://bigg.ucsd.edu/universal/reactions/34DHOXPEGOX 34DHOXPEGOX]
+
* [http://bigg.ucsd.edu/universal/reactions/3HOPCD 3HOPCD]
+
* [http://bigg.ucsd.edu/universal/reactions/4ABUTD 4ABUTD]
+
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOX 5HOXINDACTOX]
+
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOXm 5HOXINDACTOXm]
+
* [http://bigg.ucsd.edu/universal/reactions/AACPS1 AACPS1]
+
* [http://bigg.ucsd.edu/universal/reactions/AACPS1_1 AACPS1_1]
+
* [http://bigg.ucsd.edu/universal/reactions/AACPS2 AACPS2]
+
* [http://bigg.ucsd.edu/universal/reactions/AACPS3 AACPS3]
+
* [http://bigg.ucsd.edu/universal/reactions/AACPS3_1 AACPS3_1]
+
* [http://bigg.ucsd.edu/universal/reactions/AACPS6 AACPS6]
+
* [http://bigg.ucsd.edu/universal/reactions/AACPS6_1 AACPS6_1]
+
* [http://bigg.ucsd.edu/universal/reactions/AACPS8 AACPS8]
+
* [http://bigg.ucsd.edu/universal/reactions/ABOR ABOR]
+
* [http://bigg.ucsd.edu/universal/reactions/ABUTDm ABUTDm]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT10m ACACT10m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT1m ACACT1m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT1x ACACT1x]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT2 ACACT2]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT2m ACACT2m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT3 ACACT3]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT3m ACACT3m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT4m ACACT4m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT4p ACACT4p]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT5m ACACT5m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT5p ACACT5p]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT5r ACACT5r]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT6m ACACT6m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT6p ACACT6p]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT6r ACACT6r]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT7m ACACT7m]
+
* [http://bigg.ucsd.edu/universal/reactions/ACACT7p ACACT7p]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA100OR ACOA100OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA120OR ACOA120OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA140OR ACOA140OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA160OR ACOA160OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA40OR ACOA40OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA60OR ACOA60OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOA80OR ACOA80OR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD1f ACOAD1f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD1fm ACOAD1fm]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD2f ACOAD2f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD3f ACOAD3f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD4f ACOAD4f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD5f ACOAD5f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD6f ACOAD6f]
+
* [http://bigg.ucsd.edu/universal/reactions/ACOAD7f ACOAD7f]
+
* [http://bigg.ucsd.edu/universal/reactions/ALCD22xi ALCD22xi]
+
* [http://bigg.ucsd.edu/universal/reactions/ALCD22xim ALCD22xim]
+
* [http://bigg.ucsd.edu/universal/reactions/ALCD23xi ALCD23xi]
+
* [http://bigg.ucsd.edu/universal/reactions/ALCD23xim ALCD23xim]
+
* [http://bigg.ucsd.edu/universal/reactions/ALDD20x ALDD20x]
+
* [http://bigg.ucsd.edu/universal/reactions/ALDD20xm ALDD20xm]
+
* [http://bigg.ucsd.edu/universal/reactions/ALDH ALDH]
+
* [http://bigg.ucsd.edu/universal/reactions/C160CPT1 C160CPT1]
+
* [http://bigg.ucsd.edu/universal/reactions/C160CPT2 C160CPT2]
+
* [http://bigg.ucsd.edu/universal/reactions/C160CPT2rbc C160CPT2rbc]
+
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLm C2M26DCOAHLm]
+
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLx C2M26DCOAHLx]
+
* [http://bigg.ucsd.edu/universal/reactions/CHOLD CHOLD]
+
* [http://bigg.ucsd.edu/universal/reactions/CTECOAI6 CTECOAI6]
+
* [http://bigg.ucsd.edu/universal/reactions/CTECOAI7 CTECOAI7]
+
* [http://bigg.ucsd.edu/universal/reactions/CTECOAI8 CTECOAI8]
+
* [http://bigg.ucsd.edu/universal/reactions/DHACOAH DHACOAH]
+
* [http://bigg.ucsd.edu/universal/reactions/ECH_3hivcoa ECH_3hivcoa]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH11p ECOAH11p]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12 ECOAH12]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12m ECOAH12m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH1_1 ECOAH1_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH1m ECOAH1m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH1x ECOAH1x]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH2_1 ECOAH2_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH2m ECOAH2m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH3_1 ECOAH3_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH3m ECOAH3m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH4m ECOAH4m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH4p ECOAH4p]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH5 ECOAH5]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH5_1 ECOAH5_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH5m ECOAH5m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH5p ECOAH5p]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH6m ECOAH6m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH6p ECOAH6p]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH7m ECOAH7m]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH7p ECOAH7p]
+
* [http://bigg.ucsd.edu/universal/reactions/ECOAH9m ECOAH9m]
+
* [http://bigg.ucsd.edu/universal/reactions/FACOAL100p FACOAL100p]
+
* [http://bigg.ucsd.edu/universal/reactions/FACOAL120p FACOAL120p]
+
* [http://bigg.ucsd.edu/universal/reactions/FACOAL141 FACOAL141]
+
* [http://bigg.ucsd.edu/universal/reactions/FACOAL141p FACOAL141p]
+
* [http://bigg.ucsd.edu/universal/reactions/FACOAL160p FACOAL160p]
+
* [http://bigg.ucsd.edu/universal/reactions/FACOAL80p FACOAL80p]
+
* [http://bigg.ucsd.edu/universal/reactions/GLACO GLACO]
+
* [http://bigg.ucsd.edu/universal/reactions/GLACOm GLACOm]
+
* [http://bigg.ucsd.edu/universal/reactions/GLCOAS GLCOAS]
+
* [http://bigg.ucsd.edu/universal/reactions/GLUTCOADHc GLUTCOADHc]
+
* [http://bigg.ucsd.edu/universal/reactions/GLUTCOADHm GLUTCOADHm]
+
* [http://bigg.ucsd.edu/universal/reactions/GLYALDDr GLYALDDr]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD10p HACD10p]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD1_1 HACD1_1]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD1i HACD1i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD1m HACD1m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD1x HACD1x]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD2 HACD2]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD2_1 HACD2_1]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD2i HACD2i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD2m HACD2m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD3 HACD3]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD3_1 HACD3_1]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD3i HACD3i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD3m HACD3m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD4 HACD4]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD4i HACD4i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD4m HACD4m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD4p HACD4p]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD5 HACD5]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD5i HACD5i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD5m HACD5m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD5p HACD5p]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD6 HACD6]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD6i HACD6i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD6m HACD6m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD6p HACD6p]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD7 HACD7]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD7i HACD7i]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD7m HACD7m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD7p HACD7p]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD9 HACD9]
+
* [http://bigg.ucsd.edu/universal/reactions/HACD9m HACD9m]
+
* [http://bigg.ucsd.edu/universal/reactions/HACDp HACDp]
+
* [http://bigg.ucsd.edu/universal/reactions/HADPCOADH3 HADPCOADH3]
+
* [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp HBCO_nadp]
+
* [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp_m HBCO_nadp_m]
+
* [http://bigg.ucsd.edu/universal/reactions/HIBDkt HIBDkt]
+
* [http://bigg.ucsd.edu/universal/reactions/HMNO HMNO]
+
* [http://bigg.ucsd.edu/universal/reactions/IMACTD IMACTD]
+
* [http://bigg.ucsd.edu/universal/reactions/IMACTD_m IMACTD_m]
+
* [http://bigg.ucsd.edu/universal/reactions/KAT1 KAT1]
+
* [http://bigg.ucsd.edu/universal/reactions/KATp KATp]
+
* [http://bigg.ucsd.edu/universal/reactions/LIDOMO LIDOMO]
+
* [http://bigg.ucsd.edu/universal/reactions/NABTNO NABTNO]
+
* [http://bigg.ucsd.edu/universal/reactions/NABTNOm NABTNOm]
+
* [http://bigg.ucsd.edu/universal/reactions/OGCOAAT OGCOAAT]
+
* [http://bigg.ucsd.edu/universal/reactions/P4503A43r P4503A43r]
+
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOX PYLALDOX]
+
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOXm PYLALDOXm]
+
* [http://bigg.ucsd.edu/universal/reactions/RAHY RAHY]
+
* [http://bigg.ucsd.edu/universal/reactions/RNADRr RNADRr]
+
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLm T2M26DCOAHLm]
+
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLx T2M26DCOAHLx]
+
 
== External links  ==
 
== External links  ==
{{#set: common_name=Fatty acid degradation}}
+
* MetaNetX (MNX) Equation : MNXR95612
{{#set: reaction found=17}}
+
{{#set: direction=REVERSIBLE}}
{{#set: total reaction=167}}
+
{{#set: common name=1 acylglycerol 3 phosphate O acyltransferase}}
{{#set: completion rate=10.0}}
+
{{#set: gene associated=B471_RS0101020}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:38, 21 March 2018

Reaction AGPATr_BS

  • direction:
    • REVERSIBLE
  • common name:
    • 1 acylglycerol 3 phosphate O acyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 0.07 Iso C170 CoA C38H64N7O17P3S1[c] + 0.03 Tetradecanoyl-CoA (n-C14:0CoA)[c] + 0.05 Iso C160 CoA C37H62N7O17P3S1[c] + 0.01 1 Acyl sn glycerol 3 phsophate C1868H3636O700P100[c] + 0.17 Anteiso C170 CoA C38H64N7O17P3S1[c] + 0.01 Iso C140 CoA C35H58N7O17P3S1[c] + 0.2 Iso C150 CoA C36H60N7O17P3S1[c] + 0.1 Palmitoyl-CoA (n-C16:0CoA)[c] + 0.34 Anteiso C150 CoA C36H60N7O17P3S1[c] + 0.03 Stearyl CoA n C180CoA C39H66N7O17P3S[c] <=> 0.01 1 2 diacyl sn glycerol 3 phosphate C3436H6572O800P100[c] + 1.0 Coenzyme A[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR95612