Difference between revisions of "ITCY"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00540 map00540] == * common_name: ** Lipopolysaccharide biosynthesis * Synonym(s): == Reaction(s)...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ITCY ITCY] == * direction: ** LEFT-TO-RIGHT * common name: ** ITP:cytidine 5'-phosphotransferase *...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00540 map00540] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ITCY ITCY] ==
* common_name:
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* direction:
** Lipopolysaccharide biosynthesis
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** LEFT-TO-RIGHT
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* common name:
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** ITP:cytidine 5'-phosphotransferase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''2''' reactions found over '''16''' reactions in the full pathway
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* With identifiers:
* [[A5PISO]]
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** 1.0 [[cytd]][c] '''+''' 1.0 [[itp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[cmp]][c] '''+''' 1.0 [[idp]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[B471_RS22785]]
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** 1.0 Cytidine[c] '''+''' 1.0 ITP C10H11N4O14P3[c] '''=>''' 1.0 H+[c] '''+''' 1.0 CMP C9H12N3O8P[c] '''+''' 1.0 IDP C10H11N4O11P2[c]
** 1 reconstruction source(s) associated:
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*** [[orthology-aferrooxidans]]
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== Genes associated with this reaction  ==
* [[GMHEPAT]]
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Genes have been associated with this reaction based on different elements listed below.
** 1 associated gene(s):
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* Gene: [[B471_RS23885]]
*** [[B471_RS0110295]]
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** Source: [[orthology-bsubtilis]]
** 1 reconstruction source(s) associated:
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== Pathways  ==
*** [[orthology-aferrooxidans]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
== Reaction(s) not found ==
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** '''471''' reactions found over '''2349''' reactions in the full pathway
* [http://bigg.ucsd.edu/universal/reactions/AGMHE AGMHE]
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
* [http://bigg.ucsd.edu/universal/reactions/EDTXS1 EDTXS1]
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** '''68''' reactions found over '''244''' reactions in the full pathway
* [http://bigg.ucsd.edu/universal/reactions/EDTXS2 EDTXS2]
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* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
* [http://bigg.ucsd.edu/universal/reactions/HEPT4 HEPT4]
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** '''22''' reactions found over '''72''' reactions in the full pathway
* [http://bigg.ucsd.edu/universal/reactions/KDOCT2 KDOCT2]
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== Reconstruction information  ==
* [http://bigg.ucsd.edu/universal/reactions/KDOPP KDOPP]
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* Category: [[orthology]]
* [http://bigg.ucsd.edu/universal/reactions/KDOPS KDOPS]
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** Source: [[orthology-bsubtilis]]
* [http://bigg.ucsd.edu/universal/reactions/MOAT MOAT]
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*** Tool: [[pantograph]]
* [http://bigg.ucsd.edu/universal/reactions/MOAT2 MOAT2]
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* [http://bigg.ucsd.edu/universal/reactions/S7PI S7PI]
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* [http://bigg.ucsd.edu/universal/reactions/TDSK TDSK]
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* [http://bigg.ucsd.edu/universal/reactions/U23GAAT U23GAAT]
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* [http://bigg.ucsd.edu/universal/reactions/UAGAAT UAGAAT]
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* [http://bigg.ucsd.edu/universal/reactions/UHGADA UHGADA]
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== External links  ==
 
== External links  ==
{{#set: common_name=Lipopolysaccharide biosynthesis}}
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* MetaNetX (MNX) Equation : MNXR100885
{{#set: reaction found=2}}
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* KEGG Reaction : R00962
{{#set: total reaction=16}}
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* EC Number : 2.7.1.48
{{#set: completion rate=13.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ITP:cytidine 5'-phosphotransferase}}
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{{#set: gene associated=B471_RS23885}}
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{{#set: in pathway=map01100|map00240|map00983}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-bsubtilis}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:38, 21 March 2018

Reaction ITCY

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ITP:cytidine 5'-phosphotransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Cytidine[c] + 1.0 ITP C10H11N4O14P3[c] => 1.0 H+[c] + 1.0 CMP C9H12N3O8P[c] + 1.0 IDP C10H11N4O11P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100885
  • KEGG Reaction : R00962
  • EC Number : 2.7.1.48