Difference between revisions of "XTSNt2"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680] == * common_name: ** Methane metabolism * Synonym(s): == Reaction(s) found == '''...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XTSNt2 XTSNt2] == * direction: ** REVERSIBLE * common name: ** Xanthosine transport in via proton s...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/XTSNt2 XTSNt2] ==
−
* common_name:
+
* direction:
−
** Methane metabolism
+
** REVERSIBLE
 +
* common name:
 +
** Xanthosine transport in via proton symport
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''14''' reactions found over '''75''' reactions in the full pathway
+
* With identifiers:
−
* [[ACS]]
+
** 1.0 [[xtsn]][e] '''+''' 1.0 [[h]][e] '''<=>''' 1.0 [[xtsn]][c] '''+''' 1.0 [[h]][c]
−
** 3 associated gene(s):
+
* With common name(s):
−
*** [[B471_RS0108000]]
+
** 1.0 Xanthosine[e] '''+''' 1.0 H+[e] '''<=>''' 1.0 Xanthosine[c] '''+''' 1.0 H+[c]
−
*** [[B471_RS0102585]]
+
 
−
*** [[B471_RS0101560]]
+
== Genes associated with this reaction  ==
−
** 2 reconstruction source(s) associated:
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[orthology-bsubtilis]]
+
* Gene: [[B471_RS0103450]]
−
*** [[orthology-aferrooxidans]]
+
** Source: [[orthology-bsubtilis]]
−
* [[ALDD1]]
+
== Pathways  ==
−
** 2 associated gene(s):
+
== Reconstruction information  ==
−
*** [[B471_RS0115620]]
+
* Category: [[orthology]]
−
*** [[B471_RS0119455]]
+
** Source: [[orthology-bsubtilis]]
−
** 1 reconstruction source(s) associated:
+
*** Tool: [[pantograph]]
−
*** [[orthology-bsubtilis]]
+
−
* [[ENO]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119310]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[FBA]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0118210]]
+
−
*** [[B471_RS0101615]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[FBA2]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101615]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[FBA3]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[FBP]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[GHMT2r]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101930]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[MDH]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0108660]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[PFK]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[PGCD]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0105500]]
+
−
*** [[B471_RS0108770]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[PGM]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119315]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[PSERT]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0105495]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[PSP_L]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
== Reaction(s) not found ==
+
−
* [http://bigg.ucsd.edu/universal/reactions/7MHTS 7MHTS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACKr ACKr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACKrh ACKrh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACKrm ACKrm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACSm ACSm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACSp ACSp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALCD1 ALCD1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BFBP BFBP]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BFBPh BFBPh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CH2ACH CH2ACH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CH3ACH CH3ACH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/COBS COBS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHAK DHAK]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DMAMT DMAMT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ENOf ENOf]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ENOm ENOm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/FBA3hi FBA3hi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
+
−
* [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/FDH FDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/FPGPL FPGPL]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GF4GL_0 GF4GL_0]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GHMT2rm GHMT2rm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLYCDH_1 GLYCDH_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLYCK2 GLYCK2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HPYRRx HPYRRx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LPFPLT LPFPLT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LPPGS LPPGS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCMMT MCMMT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MDHf MDHf]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MDHh MDHh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MDHi2 MDHi2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MDHm MDHm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MDHp MDHp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OHPBAT OHPBAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PCPPTh PCPPTh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PCPPTm PCPPTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PFK_3 PFK_3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PFK_adp PFK_adp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PGLYDH PGLYDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PGMf PGMf]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PGMm PGMm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PPC PPC]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PPS PPS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PSAT PSAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PSP PSP]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PSP_D PSP_D]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PSP_Lpp PSP_Lpp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PTA2 PTA2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PTAr PTAr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PTArh PTArh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PTArm PTArm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/RH2CD RH2CD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/RH3CD RH3CD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SGAT SGAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SPDC SPDC]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SPT_syn SPT_syn]
+
−
* [http://bigg.ucsd.edu/universal/reactions/TMAMT TMAMT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/TYRCBOX TYRCBOX]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Methane metabolism}}
+
* RHEA:
−
{{#set: reaction found=14}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28939 28939]
−
{{#set: total reaction=75}}
+
* MetaNetX (MNX) Equation : MNXR105246
−
{{#set: completion rate=19.0}}
+
* BioCyc : META:TRANS-RXN-31
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Xanthosine transport in via proton symport}}
 +
{{#set: gene associated=B471_RS0103450}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:38, 21 March 2018

Reaction XTSNt2

  • direction:
    • REVERSIBLE
  • common name:
    • Xanthosine transport in via proton symport
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 xtsn[e] + 1.0 h[e] <=> 1.0 xtsn[c] + 1.0 h[c]
  • With common name(s):
    • 1.0 Xanthosine[e] + 1.0 H+[e] <=> 1.0 Xanthosine[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR105246
  • BioCyc : META:TRANS-RXN-31




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=XTSNt2&oldid=7553"