Difference between revisions of "TALA"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/glc__D glc__D] == * common name: ** D-Glucose * Synonym(s): == Reaction(s) known to consume...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TALA TALA] == * direction: ** REVERSIBLE * common name: ** Transaldolase * Synonym(s): == Reaction...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/glc__D glc__D] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TALA TALA] ==
 +
* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
** D-Glucose
+
** Transaldolase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[HEX1]]
+
* With identifiers:
* [[EX_glc__D]]
+
** 1.0 [[s7p]][c] '''+''' 1.0 [[g3p]][c] '''<=>''' 1.0 [[e4p]][c] '''+''' 1.0 [[f6p]][c]
* [[GLCt2_CUT]]
+
* With common name(s):
== Reaction(s) known to produce the compound ==
+
** 1.0 Sedoheptulose 7-phosphate[c] '''+''' 1.0 Glyceraldehyde 3-phosphate[c] '''<=>''' 1.0 D-Erythrose 4-phosphate[c] '''+''' 1.0 D-Fructose 6-phosphate[c]
* [[SUCR]]
+
 
* [[GLCt2_CUT]]
+
== Genes associated with this reaction  ==
* [[MALT]]
+
Genes have been associated with this reaction based on different elements listed below.
* [[TRE6PH]]
+
* Gene: [[B471_RS0106410]]
* [[BG_MADG]]
+
** Source: [[orthology-cljungdahlii]]
* [[BGLA1]]
+
** Source: [[orthology-bsubtilis]]
* [[BG_CELLB]]
+
* Gene: [[B471_RS0102315]]
* [[G1PPDM]]
+
** Source: [[orthology-cljungdahlii]]
* [[MLTG5]]
+
** Source: [[orthology-bsubtilis]]
* [[MLTG4]]
+
* Gene: [[B471_RS0108285]]
* [[MLTG7]]
+
** Source: [[orthology-aferrooxidans]]
* [[MLTG6]]
+
== Pathways  ==
* [[MLTG1]]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
* [[BG_MBDG]]
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
* [[MLTG3]]
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
* [[MLTG2]]
+
** '''148''' reactions found over '''694''' reactions in the full pathway
== Reaction(s) of unknown directionality ==
+
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
 +
** '''20''' reactions found over '''69''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: common name=D-Glucose}}
+
* RHEA:
{{#set: consumed by=HEX1|EX_glc__D|GLCt2_CUT}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17053 17053]
{{#set: produced by=SUCR|GLCt2_CUT|MALT|TRE6PH|BG_MADG|BGLA1|BG_CELLB|G1PPDM|MLTG5|MLTG4|MLTG7|MLTG6|MLTG1|BG_MBDG|MLTG3|MLTG2}}
+
* EC Number : 2.2.1.2
 +
* MetaNetX (MNX) Equation : MNXR104715
 +
* KEGG Reaction : R01827
 +
* BioCyc : META:TRANSALDOL-RXN
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Transaldolase}}
 +
{{#set: gene associated=B471_RS0106410|B471_RS0102315|B471_RS0108285}}
 +
{{#set: in pathway=map01100|map01130|map00030|map01110|map01120}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:39, 21 March 2018

Reaction TALA

  • direction:
    • REVERSIBLE
  • common name:
    • Transaldolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Sedoheptulose 7-phosphate[c] + 1.0 Glyceraldehyde 3-phosphate[c] <=> 1.0 D-Erythrose 4-phosphate[c] + 1.0 D-Fructose 6-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.2.1.2
  • MetaNetX (MNX) Equation : MNXR104715
  • KEGG Reaction : R01827
  • BioCyc : META:TRANSALDOL-RXN