Difference between revisions of "RBFK"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/LEUTA LEUTA] == * direction: ** REVERSIBLE * common name: ** Leucine transaminase * Synonym(s): ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RBFK RBFK] == * direction: ** LEFT-TO-RIGHT * common name: ** Riboflavin kinase * Synonym(s): == R...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/LEUTA LEUTA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/RBFK RBFK] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Leucine transaminase
+
** Riboflavin kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[akg]][c] '''+''' 1.0 [[leu__L]][c] '''<=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[4mop]][c]
+
** 1.0 [[ribflv]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[fmn]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 2-Oxoglutarate[c] '''+''' 1.0 L-Leucine[c] '''<=>''' 1.0 L-Glutamate[c] '''+''' 1.0 4-Methyl-2-oxopentanoate[c]
+
** 1.0 Riboflavin C17H20N4O6[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 FMN C17H19N4O9P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0110105]]
+
* Gene: [[B471_RS0100675]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[orthology-bsubtilis]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-aferrooxidans]]
−
** [[pantograph]]-[[aferrooxidans]]
+
−
* [[B471_RS0102340]]
+
−
** [[pantograph]]-[[cljungdahlii]]
+
−
** [[pantograph]]-[[bsubtilis]]
+
−
* [[B471_RS0109150]]
+
−
** [[pantograph]]-[[cljungdahlii]]
+
−
* [[B471_RS0106435]]
+
−
** [[pantograph]]-[[cljungdahlii]]
+
−
** [[pantograph]]-[[bsubtilis]]
+
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
* [[map00280]]: [http://www.genome.jp/dbget-bin/www_bget?map00280 map00280]
+
* [[map00740]]: [http://www.genome.jp/dbget-bin/www_bget?map00740 map00740]
−
** '''16''' reactions found over '''155''' reactions in the full pathway
+
** '''8''' reactions found over '''38''' reactions in the full pathway
−
* [[map00290]]: [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290]
+
−
** '''15''' reactions found over '''49''' reactions in the full pathway
+
−
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
+
−
** '''26''' reactions found over '''80''' reactions in the full pathway
+
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
+
−
** '''78''' reactions found over '''228''' reactions in the full pathway
+
−
* [[map00966]]: [http://www.genome.jp/dbget-bin/www_bget?map00966 map00966]
+
−
** '''3''' reactions found over '''10''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-bsubtilis]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[cljungdahlii]]
+
** Source: [[orthology-aferrooxidans]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18321 18321]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14357 14357]
−
* BioCyc : META:BRANCHED-CHAINAMINOTRANSFERLEU-RXN
+
* EC Number : 2.7.1.26
−
* MetaNetX (MNX) Equation : MNXR96229
+
* MetaNetX (MNX) Equation : MNXR103429
−
* KEGG Reaction : R01090
+
* KEGG Reaction : R00549
−
* EC Number : 2.6.1.42
+
* BioCyc : META:RIBOFLAVINKIN-RXN
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Leucine transaminase}}
+
{{#set: common name=Riboflavin kinase}}
−
{{#set: gene associated=B471_RS0110105|B471_RS0102340|B471_RS0109150|B471_RS0106435}}
+
{{#set: gene associated=B471_RS0100675}}
−
{{#set: in pathway=map01100|map01110|map00280|map00290|map01210|map01230|map00966}}
+
{{#set: in pathway=map01100|map01110|map00740}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
 

Latest revision as of 15:40, 21 March 2018

Reaction RBFK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Riboflavin kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Riboflavin C17H20N4O6[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 FMN C17H19N4O9P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.7.1.26
  • MetaNetX (MNX) Equation : MNXR103429
  • KEGG Reaction : R00549
  • BioCyc : META:RIBOFLAVINKIN-RXN




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