Difference between revisions of "HMGL"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DHORDi_CUT DHORDi_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HMGL HMGL] == * direction: ** LEFT-TO-RIGHT * common name: ** Hydroxymethylglutaryl-CoA lyase * Syn...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/DHORDi_CUT DHORDi_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/HMGL HMGL] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Hydroxymethylglutaryl-CoA lyase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[dhor__S]][c] '''+''' 1.0 [[o2]][c] '''=>''' 1.0 [[orot]][c] '''+''' 1.0 [[h2o2]][c]
+
** 1.0 [[hmgcoa]][c] '''=>''' 1.0 [[acac]][c] '''+''' 1.0 [[accoa]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 (S)-Dihydroorotate[c] '''+''' 1.0 O2 O2[c] '''=>''' 1.0 Orotate C5H3N2O4[c] '''+''' 1.0 Hydrogen peroxide[c]
+
** 1.0 Hydroxymethylglutaryl CoA C27H39N7O20P3S[c] '''=>''' 1.0 Acetoacetate[c] '''+''' 1.0 Acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[B471_RS0108405]]
 +
** Source: [[orthology-bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00650]]: [http://www.genome.jp/dbget-bin/www_bget?map00650 map00650]
 +
** '''21''' reactions found over '''156''' reactions in the full pathway
 +
* [[map00280]]: [http://www.genome.jp/dbget-bin/www_bget?map00280 map00280]
 +
** '''16''' reactions found over '''155''' reactions in the full pathway
 +
* [[map00072]]: [http://www.genome.jp/dbget-bin/www_bget?map00072 map00072]
 +
** '''8''' reactions found over '''37''' reactions in the full pathway
 +
* [[map00281]]: [http://www.genome.jp/dbget-bin/www_bget?map00281 map00281]
 +
** '''3''' reactions found over '''56''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction found from orthology but we fixed reversibility based on biological expertise]]
+
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* MetaNetX (MNX) Equation : MNXR100662
 +
* EC Number : 4.1.3.4
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: in pathway=}}
+
{{#set: common name=Hydroxymethylglutaryl-CoA lyase}}
{{#set: reconstruction category=manual}}
+
{{#set: gene associated=B471_RS0108405}}
{{#set: reconstruction source=reaction found from orthology but we fixed reversibility based on biological expertise}}
+
{{#set: in pathway=map01100|map00650|map00280|map00072|map00281}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:42, 21 March 2018

Reaction HMGL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Hydroxymethylglutaryl-CoA lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Hydroxymethylglutaryl CoA C27H39N7O20P3S[c] => 1.0 Acetoacetate[c] + 1.0 Acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100662
  • EC Number : 4.1.3.4