Difference between revisions of "PMPK"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/ocACP ocACP] == * common name: ** Octanoyl-ACP (n-C8:0ACP) * Synonym(s): == Reaction(s) know...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PMPK PMPK] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphomethylpyrimidine kinase * Syno...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/PMPK PMPK] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Phosphomethylpyrimidine kinase |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 1.0 [[atp]][c] '''+''' 1.0 [[4ampm]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[2mahmp]][c] |
| − | * [[ | + | * With common name(s): |
| − | == | + | ** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 4-Amino-2-methyl-5-phosphomethylpyrimidine[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate[c] |
| − | * [[ | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[B471_RS0108570]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730] | ||
| + | ** '''8''' reactions found over '''24''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19893 19893] |
| − | {{#set: | + | * EC Number : 2.7.4.7 |
| − | {{#set: | + | * MetaNetX (MNX) Equation : MNXR103045 |
| + | * KEGG Reaction : R04509 | ||
| + | * BioCyc : META:PYRIMSYN3-RXN | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Phosphomethylpyrimidine kinase}} | ||
| + | {{#set: gene associated=B471_RS0108570}} | ||
| + | {{#set: in pathway=map01100|map00730}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:43, 21 March 2018
Contents
Reaction PMPK
- direction:
- LEFT-TO-RIGHT
- common name:
- Phosphomethylpyrimidine kinase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 ATP C10H12N5O13P3[c] + 1.0 4-Amino-2-methyl-5-phosphomethylpyrimidine[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS0108570
- Source: orthology-bsubtilis
- Source: orthology-aferrooxidans
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map00730: map00730
- 8 reactions found over 24 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-bsubtilis
External links
- RHEA:
- EC Number : 2.7.4.7
- MetaNetX (MNX) Equation : MNXR103045
- KEGG Reaction : R04509
- BioCyc : META:PYRIMSYN3-RXN
