Difference between revisions of "PPBNGS"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/trdox trdox] == * common name: ** Oxidized thioredoxin * Synonym(s): == Reaction(s) known to...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPBNGS PPBNGS] == * direction: ** LEFT-TO-RIGHT * common name: ** Porphobilinogen synthase * Synony...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/PPBNGS PPBNGS] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Porphobilinogen synthase |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | = | + | ** 2.0 [[5aop]][c] '''=>''' 2.0 [[h2o]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[ppbng]][c] |
| − | * [[ | + | * With common name(s): |
| − | * [[ | + | ** 2.0 5-Amino-4-oxopentanoate[c] '''=>''' 2.0 H2O H2O[c] '''+''' 1.0 H+[c] '''+''' 1.0 Porphobilinogen[c] |
| − | * [[ | + | |
| − | * [[ | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[ | + | * Gene: [[B471_RS0108710]] |
| − | == | + | ** Source: [[orthology-bsubtilis]] |
| − | * [[ | + | ** Source: [[orthology-aferrooxidans]] |
| − | * [[ | + | == Pathways == |
| − | * [[ | + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] |
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''212''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860] | ||
| + | ** '''23''' reactions found over '''106''' reactions in the full pathway | ||
| + | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| + | ** '''101''' reactions found over '''715''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * EC Number : 4.2.1.24 |
| − | {{#set: | + | * BioCyc : META:PORPHOBILSYNTH-RXN |
| − | {{#set: | + | * MetaNetX (MNX) Equation : MNXR103095 |
| − | {{#set: | + | * RHEA: |
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24064 24064] | ||
| + | * Reactome : REACT_R-ATH-189439 | ||
| + | * KEGG Reaction : R00036 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Porphobilinogen synthase}} | ||
| + | {{#set: gene associated=B471_RS0108710}} | ||
| + | {{#set: in pathway=map01100|map01110|map00860|map01120}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:43, 21 March 2018
Contents
Reaction PPBNGS
- direction:
- LEFT-TO-RIGHT
- common name:
- Porphobilinogen synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 2.0 5-Amino-4-oxopentanoate[c] => 2.0 H2O H2O[c] + 1.0 H+[c] + 1.0 Porphobilinogen[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS0108710
- Source: orthology-bsubtilis
- Source: orthology-aferrooxidans
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map01110: map01110
- 212 reactions found over 1054 reactions in the full pathway
- map00860: map00860
- 23 reactions found over 106 reactions in the full pathway
- map01120: map01120
- 101 reactions found over 715 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-bsubtilis
External links
- EC Number : 4.2.1.24
- BioCyc : META:PORPHOBILSYNTH-RXN
- MetaNetX (MNX) Equation : MNXR103095
- RHEA:
- Reactome : REACT_R-ATH-189439
- KEGG Reaction : R00036
