Difference between revisions of "EX murein5px4p"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TDPDRR TDPDRR] == * direction: ** LEFT-TO-RIGHT * common name: ** DTDP-4-dehydrorhamnose reductase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EX_murein5px4p EX_murein5px4p] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TDPDRR TDPDRR] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/EX_murein5px4p EX_murein5px4p] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** DTDP-4-dehydrorhamnose reductase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nadph]][c] '''+''' 1.0 [[dtdp4d6dm]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[dtdprmn]][c]
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** 1.0 [[murein5px4p]][e] '''=>'''  
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 DTDP-4-dehydro-6-deoxy-L-mannose[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 DTDP-L-rhamnose[c]
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** 1.0 Two disacharide linked murein units, pentapeptide crosslinked tetrapeptide (A2pm->D-ala) (middle of chain)[e] '''=>'''  
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0114510]]
 
−
** [[pantograph]]-[[cljungdahlii]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
 
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** '''8''' reactions found over '''14''' reactions in the full pathway
 
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
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** '''148''' reactions found over '''694''' reactions in the full pathway
 
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* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-missing_rxn_creator]]
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*** [[aferrooxidans]]
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*** Comment: [[reaction from orthology templates not found by pantograph]]
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*** [[cljungdahlii]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21796 21796]
 
−
* BioCyc : META:DTDPDEHYRHAMREDUCT-RXN
 
−
* MetaNetX (MNX) Equation : MNXR104760
 
−
* KEGG Reaction : R02777
 
−
* EC Number : 1.1.1.133
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=DTDP-4-dehydrorhamnose reductase}}
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{{#set: in pathway=}}
−
{{#set: gene associated=B471_RS0114510}}
+
{{#set: reconstruction category=manual}}
−
{{#set: in pathway=map00521|map01130|map00523}}
+
{{#set: reconstruction source=manual-missing_rxn_creator}}
−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=reaction from orthology templates not found by pantograph}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii}}
+

Latest revision as of 16:45, 21 March 2018

Reaction EX_murein5px4p

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Two disacharide linked murein units, pentapeptide crosslinked tetrapeptide (A2pm->D-ala) (middle of chain)[e] =>

Genes associated with this reaction

Pathways

Reconstruction information

External links

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