Difference between revisions of "ARGDC"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AMAOTr AMAOTr] == * direction: ** REVERSIBLE * common name: ** Adenosylmethionine-8-amino-7-oxonona...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ARGDC ARGDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Arginine decarboxylase * Synonym(s)...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/ARGDC ARGDC] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** Arginine decarboxylase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[arg__L]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[agm]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 L-Arginine[c] '''+''' 1.0 H+[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Agmatine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[B471_RS21410]] |
| − | ** [[ | + | ** Source: [[orthology-cljungdahlii]] |
| − | * | + | ** Source: [[orthology-bsubtilis]] |
| + | * Gene: [[B471_RS21240]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
== Pathways == | == Pathways == | ||
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| − | ** ''' | + | ** '''471''' reactions found over '''2349''' reactions in the full pathway |
| − | * [[ | + | * [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330] |
| − | ** ''' | + | ** '''19''' reactions found over '''149''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-cljungdahlii]] |
| − | *** [[aferrooxidans]] | + | *** Tool: [[pantograph]] |
| − | *** [[ | + | ** Source: [[orthology-bsubtilis]] |
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| + | * EC Number : 4.1.1.19 | ||
| + | * BioCyc : META:ARGDECARBOX-RXN | ||
| + | * MetaNetX (MNX) Equation : MNXR95940 | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17641 17641] |
| − | * | + | * Reactome : REACT_R-ATH-350598 |
| − | + | * KEGG Reaction : R00566 | |
| − | * KEGG Reaction : | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | + | {{#set: common name=Arginine decarboxylase}} | |
| − | {{#set: direction= | + | {{#set: gene associated=B471_RS21410|B471_RS21240}} |
| − | {{#set: common name= | + | {{#set: in pathway=map01100|map00330}} |
| − | {{#set: gene associated= | + | |
| − | {{#set: in pathway=map01100| | + | |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Latest revision as of 15:45, 21 March 2018
Contents
Reaction ARGDC
- direction:
- LEFT-TO-RIGHT
- common name:
- Arginine decarboxylase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 L-Arginine[c] + 1.0 H+[c] => 1.0 CO2 CO2[c] + 1.0 Agmatine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS21410
- Source: orthology-cljungdahlii
- Source: orthology-bsubtilis
- Gene: B471_RS21240
- Source: orthology-aferrooxidans
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map00330: map00330
- 19 reactions found over 149 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- EC Number : 4.1.1.19
- BioCyc : META:ARGDECARBOX-RXN
- MetaNetX (MNX) Equation : MNXR95940
- RHEA:
- Reactome : REACT_R-ATH-350598
- KEGG Reaction : R00566
