Difference between revisions of "GART"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DMPPS DMPPS] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-hydroxy-2-methyl-2-(E)-butenyl 4-...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GART GART] == * direction: ** LEFT-TO-RIGHT * common name: ** GAR transformylase-T * Synonym(s): =...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DMPPS DMPPS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GART GART] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp)
+
** GAR transformylase-T
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][c] '''+''' 1.0 [[h2mb4p]][c] '''+''' 1.0 [[nadh]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[dmpp]][c] '''+''' 1.0 [[nad]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[for]][c] '''+''' 1.0 [[gar]][c] '''=>''' 1.0 [[fgam]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 Dimethylallyl diphosphate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Formate[c] '''+''' 1.0 N1-(5-Phospho-D-ribosyl)glycinamide[c] '''=>''' 1.0 N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0105795]]
+
* Gene: [[B471_RS0101625]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-bsubtilis]]
 +
* Gene: [[B471_RS0105250]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
 
−
** '''16''' reactions found over '''67''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-bsubtilis]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR97524
+
* RHEA:
−
* EC Number : 1.17.1.2
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24829 24829]
 +
* EC Number : 2.1.2
 +
* MetaNetX (MNX) Equation : MNXR100042
 +
* KEGG Reaction : R06974
 +
* BioCyc : META:GARTRANSFORMYL2-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp)}}
+
{{#set: common name=GAR transformylase-T}}
−
{{#set: gene associated=B471_RS0105795}}
+
{{#set: gene associated=B471_RS0101625|B471_RS0105250}}
−
{{#set: in pathway=map01130|map01110|map00900}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Latest revision as of 15:45, 21 March 2018

Reaction GART

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GAR transformylase-T
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Formate[c] + 1.0 N1-(5-Phospho-D-ribosyl)glycinamide[c] => 1.0 N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide[c] + 1.0 H+[c] + 1.0 Phosphate[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.1.2
  • MetaNetX (MNX) Equation : MNXR100042
  • KEGG Reaction : R06974
  • BioCyc : META:GARTRANSFORMYL2-RXN




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