Difference between revisions of "NDPK4"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PYK PYK] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyruvate kinase * Synonym(s): == React...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK4 NDPK4] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:dTD...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PYK PYK] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK4 NDPK4] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Pyruvate kinase
+
** Nucleoside-diphosphate kinase (ATP:dTDP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[pep]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[atp]][c]
+
** 1.0 [[dtdp]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[dttp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Phosphoenolpyruvate[c] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''=>''' 1.0 Pyruvate[c] '''+''' 1.0 ATP C10H12N5O13P3[c]
+
** 1.0 DTDP C10H13N2O11P2[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 DTTP C10H13N2O14P3[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0109145]]
+
* Gene: [[B471_RS0100900]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[orthology-bsubtilis]]
−
** [[pantograph]]-[[bsubtilis]]
+
−
** [[pantograph]]-[[aferrooxidans]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''68''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''64''' reactions found over '''298''' reactions in the full pathway
 
** '''64''' reactions found over '''298''' reactions in the full pathway
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''101''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''51''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 
−
** '''22''' reactions found over '''163''' reactions in the full pathway
 
−
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 
−
** '''20''' reactions found over '''149''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''78''' reactions found over '''228''' reactions in the full pathway
 
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-bsubtilis]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[cljungdahlii]]
+
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 2.7.1.40
 
−
* BioCyc : META:PEPDEPHOS-RXN
 
−
* MetaNetX (MNX) Equation : MNXR103371
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18157 18157]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27682 27682]
−
* Reactome : REACT_R-ATH-71670
+
* EC Number : 2.7.4.6
−
* KEGG Reaction : R00200
+
* MetaNetX (MNX) Equation : MNXR101937
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* KEGG Reaction : R02093
−
{{#set: common name=Pyruvate kinase}}
+
* BioCyc : META:DTDPKIN-RXN
−
{{#set: gene associated=B471_RS0109145}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: in pathway=map01100|map01110|map00230|map01120|map01200|map00620|map00010|map01230|map01130}}
+
{{#set: common name=Nucleoside-diphosphate kinase (ATP:dTDP)}}
 +
{{#set: gene associated=B471_RS0100900}}
 +
{{#set: in pathway=map00240|map01100|map01110|map00230|map01130}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
 

Latest revision as of 15:46, 21 March 2018

Reaction NDPK4

  • direction:
    • REVERSIBLE
  • common name:
    • Nucleoside-diphosphate kinase (ATP:dTDP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 DTDP C10H13N2O11P2[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 ADP C10H12N5O10P2[c] + 1.0 DTTP C10H13N2O14P3[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.7.4.6
  • MetaNetX (MNX) Equation : MNXR101937
  • KEGG Reaction : R02093
  • BioCyc : META:DTDPKIN-RXN




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