Difference between revisions of "ECOAH7"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EAR140y_CUT EAR140y_CUT] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ECOAH7 ECOAH7] == * direction: ** REVERSIBLE * common name: ** 3-hydroxyacyl-CoA dehydratase (3-hyd...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/EAR140y_CUT EAR140y_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ECOAH7 ECOAH7] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** 3-hydroxyacyl-CoA dehydratase (3-hydroxyhexadecanoyl-CoA)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[tmrs2eACP]][c] '''+''' 1.0 [[nadph]][c] '''<=>''' 1.0 [[myrsACP]][c] '''+''' 1.0 [[nadp]][c]
+
** 1.0 [[3hhdcoa]][c] '''<=>''' 1.0 [[hdd2coa]][c] '''+''' 1.0 [[h2o]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 Trans-Tetradec-2-enoyl-[acyl-carrier protein][c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''<=>''' 1.0 Myristoyl-ACP (n-C14:0ACP)[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
+
** 1.0 (S)-3-Hydroxyhexadecanoyl-CoA[c] '''<=>''' 1.0 Trans-Hexadec-2-enoyl-CoA[c] '''+''' 1.0 H2O H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0108775]]
+
* Gene: [[B471_RS0110785]]
** MANUAL
+
** Source: [[orthology-bsubtilis]]
 +
* Gene: [[B471_RS0115580]]
 +
** Source: [[orthology-bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
 +
** '''43''' reactions found over '''182''' reactions in the full pathway
 +
* [[map00071]]: [http://www.genome.jp/dbget-bin/www_bget?map00071 map00071]
 +
** '''17''' reactions found over '''167''' reactions in the full pathway
 +
* [[map00062]]: [http://www.genome.jp/dbget-bin/www_bget?map00062 map00062]
 +
** '''11''' reactions found over '''111''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction found from orthology but we fixed reversibility based on biological expertise]]
+
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 4.2.1.17
 +
* BioCyc : META:RXN-14272
 +
* MetaNetX (MNX) Equation : MNXR97892
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31163 31163]
 +
* Reactome : REACT_R-BTA-77301
 +
* KEGG Reaction : R04738
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: gene associated=B471_RS0108775}}
+
{{#set: common name=3-hydroxyacyl-CoA dehydratase (3-hydroxyhexadecanoyl-CoA)}}
{{#set: in pathway=}}
+
{{#set: gene associated=B471_RS0110785|B471_RS0115580}}
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map01212|map00071|map00062}}
{{#set: reconstruction source=reaction found from orthology but we fixed reversibility based on biological expertise}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:46, 21 March 2018

Reaction ECOAH7

  • direction:
    • REVERSIBLE
  • common name:
    • 3-hydroxyacyl-CoA dehydratase (3-hydroxyhexadecanoyl-CoA)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 (S)-3-Hydroxyhexadecanoyl-CoA[c] <=> 1.0 Trans-Hexadec-2-enoyl-CoA[c] + 1.0 H2O H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 4.2.1.17
  • BioCyc : META:RXN-14272
  • MetaNetX (MNX) Equation : MNXR97892
  • RHEA:
  • Reactome : REACT_R-BTA-77301
  • KEGG Reaction : R04738