Difference between revisions of "ALAALAr"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EAR161y EAR161y] == * direction: ** LEFT-TO-RIGHT * common name: ** Enoyl-[acyl-carrier-protein] re...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAr ALAALAr] == * direction: ** REVERSIBLE * common name: ** D-alanine-D-alanine ligase (revers...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/EAR161y EAR161y] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAr ALAALAr] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:1)
+
** D-alanine-D-alanine ligase (reversible)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nadph]][c] '''+''' 1.0 [[t3c9palmeACP]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[hdeACP]][c] '''+''' 1.0 [[nadp]][c]
+
** 2.0 [[ala__D]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[alaala]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 Trans-3-cis-9-palmitoleoyl-[acyl-carrier protein][c] '''+''' 1.0 H+[c] '''=>''' 1.0 Cis-hexadec-9-enoyl-[acyl-carrier protein] (n-C16:1)[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
+
** 2.0 D-Alanine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 D-Alanyl-D-alanine[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[B471_RS0112130]]
 +
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-bsubtilis]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
+
* [[map00473]]: [http://www.genome.jp/dbget-bin/www_bget?map00473 map00473]
−
** '''28''' reactions found over '''67''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
−
** '''54''' reactions found over '''160''' reactions in the full pathway
+
** '''14''' reactions found over '''27''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR97858
+
* RHEA:
−
* EC Number : 1.3.1.10
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11224 11224]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* EC Number : 6.3.2.4
−
{{#set: common name=Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:1)}}
+
* MetaNetX (MNX) Equation : MNXR95678
−
{{#set: in pathway=map01100|map00780|map00061}}
+
* KEGG Reaction : R01150
−
{{#set: reconstruction category=manual}}
+
* BioCyc : META:DALADALALIG-RXN
−
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=D-alanine-D-alanine ligase (reversible)}}
 +
{{#set: gene associated=B471_RS0112130}}
 +
{{#set: in pathway=map01100|map00473|map00550}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:46, 21 March 2018

Reaction ALAALAr

  • direction:
    • REVERSIBLE
  • common name:
    • D-alanine-D-alanine ligase (reversible)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2.0 D-Alanine[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 D-Alanyl-D-alanine[c] + 1.0 Phosphate[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 6.3.2.4
  • MetaNetX (MNX) Equation : MNXR95678
  • KEGG Reaction : R01150
  • BioCyc : META:DALADALALIG-RXN




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