Difference between revisions of "PGM"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TDPGDH TDPGDH] == * direction: ** LEFT-TO-RIGHT * common name: ** DTDPglucose 4,6-dehydratase * Syn...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGM PGM] == * direction: ** REVERSIBLE * common name: ** Phosphoglycerate mutase * Synonym(s): ==...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/TDPGDH TDPGDH] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGM PGM] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** DTDPglucose 4,6-dehydratase
+
** Phosphoglycerate mutase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[dtdpglu]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[dtdp4d6dg]][c]
+
** 1.0 [[2pg]][c] '''<=>''' 1.0 [[3pg]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 DTDPglucose[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 DTDP-4-dehydro-6-deoxy-D-glucose[c]
+
** 1.0 D-Glycerate 2-phosphate[c] '''<=>''' 1.0 3-Phospho-D-glycerate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0104495]]
+
* Gene: [[B471_RS0119315]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[orthology-cljungdahlii]]
−
** [[pantograph]]-[[aferrooxidans]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''8''' reactions found over '''14''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''51''' reactions found over '''220''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
 +
** '''14''' reactions found over '''75''' reactions in the full pathway
 +
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 +
** '''20''' reactions found over '''149''' reactions in the full pathway
 +
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 +
** '''24''' reactions found over '''133''' reactions in the full pathway
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
** '''148''' reactions found over '''694''' reactions in the full pathway
−
* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[map00525]]: [http://www.genome.jp/dbget-bin/www_bget?map00525 map00525]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[map01055]]: [http://www.genome.jp/dbget-bin/www_bget?map01055 map01055]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[cljungdahlii]]
+
 
== External links  ==
 
== External links  ==
 +
* EC Number : 5.4.2.1
 +
* BioCyc : META:3PGAREARR-RXN
 +
* MetaNetX (MNX) Equation : MNXR102547
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17221 17221]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15901 15901]
−
* BioCyc : META:DTDPGLUCDEHYDRAT-RXN
+
* Reactome : REACT_R-ATH-71445
−
* MetaNetX (MNX) Equation : MNXR104761
+
* KEGG Reaction : R01518
−
* KEGG Reaction : R06513
+
{{#set: direction=REVERSIBLE}}
−
* EC Number : 4.2.1.46
+
{{#set: common name=Phosphoglycerate mutase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: gene associated=B471_RS0119315}}
−
{{#set: common name=DTDPglucose 4,6-dehydratase}}
+
{{#set: in pathway=map01100|map01110|map01120|map01200|map01230|map00680|map00010|map00260|map01130}}
−
{{#set: gene associated=B471_RS0104495}}
+
−
{{#set: in pathway=map00521|map01130|map00523|map00525|map01055}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii}}
 

Latest revision as of 16:47, 21 March 2018

Reaction PGM

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoglycerate mutase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glycerate 2-phosphate[c] <=> 1.0 3-Phospho-D-glycerate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 5.4.2.1
  • BioCyc : META:3PGAREARR-RXN
  • MetaNetX (MNX) Equation : MNXR102547
  • RHEA:
  • Reactome : REACT_R-ATH-71445
  • KEGG Reaction : R01518




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