Difference between revisions of "PGK"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EX_murein4p3p EX_murein4p3p] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGK PGK] == * direction: ** REVERSIBLE * common name: ** Phosphoglycerate kinase * Synonym(s): ==...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/EX_murein4p3p EX_murein4p3p] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGK PGK] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Phosphoglycerate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[murein4p3p]][e] '''=>'''  
+
** 1.0 [[3pg]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[13dpg]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Two linked disacharide tetrapeptide and tripeptide murein units (uncrosslinked, middle of chain)[e] '''=>'''  
+
** 1.0 3-Phospho-D-glycerate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 3-Phospho-D-glyceroyl phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[B471_RS0119325]]
 +
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''51''' reactions found over '''220''' reactions in the full pathway
 +
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
 +
** '''18''' reactions found over '''71''' reactions in the full pathway
 +
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 +
** '''20''' reactions found over '''149''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[reaction from orthology templates not found by pantograph]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* EC Number : 2.7.2.3
−
{{#set: in pathway=}}
+
* BioCyc : META:PHOSGLYPHOS-RXN
−
{{#set: reconstruction category=manual}}
+
* MetaNetX (MNX) Equation : MNXR102538
−
{{#set: reconstruction source=reaction from orthology templates not found by pantograph}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14801 14801]
 +
* Reactome : REACT_R-ATH-70486
 +
* KEGG Reaction : R01512
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Phosphoglycerate kinase}}
 +
{{#set: gene associated=B471_RS0119325}}
 +
{{#set: in pathway=map01100|map01110|map01120|map01200|map00710|map00010|map01230|map01130}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:47, 21 March 2018

Reaction PGK

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoglycerate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 3-Phospho-D-glycerate[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 ADP C10H12N5O10P2[c] + 1.0 3-Phospho-D-glyceroyl phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.2.3
  • BioCyc : META:PHOSGLYPHOS-RXN
  • MetaNetX (MNX) Equation : MNXR102538
  • RHEA:
  • Reactome : REACT_R-ATH-70486
  • KEGG Reaction : R01512




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