Difference between revisions of "PPCDC"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FACOAL160 FACOAL160] == * direction: ** REVERSIBLE * common name: ** Fatty acid CoA ligase hexade...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPCDC PPCDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphopantothenoylcysteine decarbo...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/FACOAL160 FACOAL160] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPCDC PPCDC] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Fatty acid  CoA ligase  hexadecanoate
+
** Phosphopantothenoylcysteine decarboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[hdca]][c] '''+''' 1.0 [[coa]][c] '''<=>''' 1.0 [[pmtcoa]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[ppi]][c]
+
** 1.0 [[4ppcys]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[pan4p]][c] '''+''' 1.0 [[co2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Hexadecanoate (n-C16:0)[c] '''+''' 1.0 Coenzyme A[c] '''<=>''' 1.0 Palmitoyl-CoA (n-C16:0CoA)[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Diphosphate[c]
+
** 1.0 N-((R)-4-Phosphopantothenoyl)-L-cysteine[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Pantetheine 4'-phosphate[c] '''+''' 1.0 CO2 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0110780]]
+
* Gene: [[B471_RS0109325]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-cljungdahlii]]
−
* [[B471_RS22560]]
+
** Source: [[orthology-bsubtilis]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
+
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
−
** '''43''' reactions found over '''182''' reactions in the full pathway
+
** '''20''' reactions found over '''75''' reactions in the full pathway
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
−
** '''54''' reactions found over '''160''' reactions in the full pathway
+
−
* [[map00071]]: [http://www.genome.jp/dbget-bin/www_bget?map00071 map00071]
+
−
** '''17''' reactions found over '''167''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
−
*** [[bsubtilis]]
+
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 4.1.1.36
 +
* BioCyc : META:P-PANTOCYSDECARB-RXN
 +
* MetaNetX (MNX) Equation : MNXR103098
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30751 30751]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16793 16793]
−
* BioCyc : META:RXN-9623
+
* Reactome : REACT_R-ATH-196840
−
* MetaNetX (MNX) Equation : MNXR99153
+
* KEGG Reaction : R03269
−
* KEGG Reaction : R01280
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* EC Number : 6.2.1.3
+
{{#set: common name=Phosphopantothenoylcysteine decarboxylase}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: gene associated=B471_RS0109325}}
−
{{#set: common name=Fatty acid  CoA ligase  hexadecanoate }}
+
{{#set: in pathway=map01100|map00770}}
−
{{#set: gene associated=B471_RS0110780|B471_RS22560}}
+
−
{{#set: in pathway=map01100|map01212|map00061|map00071}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=cljungdahlii|bsubtilis}}
 

Latest revision as of 16:47, 21 March 2018

Reaction PPCDC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphopantothenoylcysteine decarboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 N-((R)-4-Phosphopantothenoyl)-L-cysteine[c] + 1.0 H+[c] => 1.0 Pantetheine 4'-phosphate[c] + 1.0 CO2 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 4.1.1.36
  • BioCyc : META:P-PANTOCYSDECARB-RXN
  • MetaNetX (MNX) Equation : MNXR103098
  • RHEA:
  • Reactome : REACT_R-ATH-196840
  • KEGG Reaction : R03269




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