Difference between revisions of "DXPS"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/BTNt2i_CUT BTNt2i_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DXPS DXPS] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-deoxy-D-xylulose 5-phosphate syntha...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/DXPS DXPS] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** 1-deoxy-D-xylulose 5-phosphate synthase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[pyr]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[g3p]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[dxyl5p]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Pyruvate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Glyceraldehyde 3-phosphate[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 1-deoxy-D-xylulose 5-phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[B471_RS0101820]] |
| − | ** | + | ** Source: [[orthology-bsubtilis]] |
| + | ** Source: [[orthology-aferrooxidans]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730] | ||
| + | ** '''8''' reactions found over '''24''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''212''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''148''' reactions found over '''694''' reactions in the full pathway | ||
| + | * [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900] | ||
| + | ** '''16''' reactions found over '''67''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-bsubtilis]] |
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12605 12605] | ||
| + | * EC Number : 2.2.1.7 | ||
| + | * MetaNetX (MNX) Equation : MNXR97831 | ||
| + | * KEGG Reaction : R05636 | ||
| + | * BioCyc : META:DXS-RXN | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=1-deoxy-D-xylulose 5-phosphate synthase}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=B471_RS0101820}} |
| − | {{#set: reconstruction category= | + | {{#set: in pathway=map01100|map00730|map01110|map01130|map00900}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction category=orthology}} |
| + | {{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:36, 21 March 2018
Contents
Reaction DXPS
- direction:
- LEFT-TO-RIGHT
- common name:
- 1-deoxy-D-xylulose 5-phosphate synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Pyruvate[c] + 1.0 H+[c] + 1.0 Glyceraldehyde 3-phosphate[c] => 1.0 CO2 CO2[c] + 1.0 1-deoxy-D-xylulose 5-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS0101820
- Source: orthology-bsubtilis
- Source: orthology-aferrooxidans
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map00730: map00730
- 8 reactions found over 24 reactions in the full pathway
- map01110: map01110
- 212 reactions found over 1054 reactions in the full pathway
- map01130: map01130
- 148 reactions found over 694 reactions in the full pathway
- map00900: map00900
- 16 reactions found over 67 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-bsubtilis
External links
- RHEA:
- EC Number : 2.2.1.7
- MetaNetX (MNX) Equation : MNXR97831
- KEGG Reaction : R05636
- BioCyc : META:DXS-RXN
