Difference between revisions of "DUTPDP"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3HAD40 3HAD40] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier-prote...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DUTPDP DUTPDP] == * direction: ** LEFT-TO-RIGHT * common name: ** DUTP diphosphatase * Synonym(s):...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/3HAD40 3HAD40] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DUTPDP DUTPDP] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C4:0)
+
** DUTP diphosphatase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[3haACP]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[but2eACP]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[dutp]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[dump]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 (3R)-3-Hydroxyacyl-[acyl-carrier protein][c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 But-2-enoyl-[acyl-carrier protein][c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 DUTP C9H11N2O14P3[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 DUMP C9H11N2O8P[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[B471_RS0101570]]
 +
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-bsubtilis]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''68''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR94885
+
* EC Number : 3.6.1.-
* EC Number : 4.2.1.58
+
* BioCyc : META:DUTP-PYROP-RXN
 +
* MetaNetX (MNX) Equation : MNXR97822
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10248 10248]
 +
* Reactome : REACT_R-ATH-73666
 +
* KEGG Reaction : R02100
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C4:0)}}
+
{{#set: common name=DUTP diphosphatase}}
{{#set: in pathway=}}
+
{{#set: gene associated=B471_RS0101570}}
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map00240|map01100}}
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:38, 21 March 2018

Reaction DUTPDP

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DUTP diphosphatase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 DUTP C9H11N2O14P3[c] => 1.0 Diphosphate[c] + 1.0 DUMP C9H11N2O8P[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 3.6.1.-
  • BioCyc : META:DUTP-PYROP-RXN
  • MetaNetX (MNX) Equation : MNXR97822
  • RHEA:
  • Reactome : REACT_R-ATH-73666
  • KEGG Reaction : R02100