Difference between revisions of "SHKK"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/G1PTT G1PTT] == * direction: ** LEFT-TO-RIGHT * common name: ** Glucose-1-phosphate thymidylyltrans...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SHKK SHKK] == * direction: ** LEFT-TO-RIGHT * common name: ** Shikimate kinase * Synonym(s): == Re...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/G1PTT G1PTT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SHKK SHKK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glucose-1-phosphate thymidylyltransferase
+
** Shikimate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][c] '''+''' 1.0 [[dttp]][c] '''+''' 1.0 [[g1p]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[dtdpglu]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[skm]][c] '''=>''' 1.0 [[skm5p]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 DTTP C10H13N2O14P3[c] '''+''' 1.0 D-Glucose 1-phosphate[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 DTDPglucose[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Shikimate[c] '''=>''' 1.0 Shikimate 5-phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0104485]]
+
* Gene: [[B471_RS20350]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-bsubtilis]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''8''' reactions found over '''14''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
** '''148''' reactions found over '''694''' reactions in the full pathway
−
* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
+
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''17''' reactions found over '''59''' reactions in the full pathway
−
* [[map00525]]: [http://www.genome.jp/dbget-bin/www_bget?map00525 map00525]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 2.7.1.71
 +
* BioCyc : META:SHIKIMATE-KINASE-RXN
 +
* MetaNetX (MNX) Equation : MNXR104379
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15225 15225]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13121 13121]
−
* BioCyc : META:DTDPGLUCOSEPP-RXN
+
* Reactome : REACT_R-MTU-964939
−
* MetaNetX (MNX) Equation : MNXR99846
+
* KEGG Reaction : R02412
−
* KEGG Reaction : R02328
+
−
* EC Number : 2.7.7.24
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glucose-1-phosphate thymidylyltransferase}}
+
{{#set: common name=Shikimate kinase}}
−
{{#set: gene associated=B471_RS0104485}}
+
{{#set: gene associated=B471_RS20350}}
−
{{#set: in pathway=map00521|map01130|map00523|map00525}}
+
{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=cljungdahlii}}
 

Latest revision as of 15:38, 21 March 2018

Reaction SHKK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Shikimate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Shikimate[c] => 1.0 Shikimate 5-phosphate[c] + 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.1.71
  • BioCyc : META:SHIKIMATE-KINASE-RXN
  • MetaNetX (MNX) Equation : MNXR104379
  • RHEA:
  • Reactome : REACT_R-MTU-964939
  • KEGG Reaction : R02412




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