Difference between revisions of "DURAD"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICH_CUT ICH_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With iden...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DURAD DURAD] == * direction: ** REVERSIBLE * common name: ** Dihydrouracil dehydrogenase (NADP) * S...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICH_CUT ICH_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DURAD DURAD] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Dihydrouracil dehydrogenase (NADP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[fprica]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[imp]][c]
+
** 1.0 [[56dura]][c] '''+''' 1.0 [[nadp]][c] '''<=>''' 1.0 [[ura]][c] '''+''' 1.0 [[nadph]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 IMP C10H11N4O8P[c]
+
** 1.0 5,6-dihydrouracil[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''<=>''' 1.0 Uracil[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0105245]]
+
* Gene: [[B471_RS0103590]]
** MANUAL
+
** Source: [[orthology-cljungdahlii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''68''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
 +
** '''20''' reactions found over '''75''' reactions in the full pathway
 +
* [[map00410]]: [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410]
 +
** '''9''' reactions found over '''91''' reactions in the full pathway
 +
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 +
** '''22''' reactions found over '''72''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction found from orthology but we fixed reversibility based on biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
* EC Number : 1.3.1.2
{{#set: gene associated=B471_RS0105245}}
+
* BioCyc : META:1.3.1.2-RXN
{{#set: in pathway=}}
+
* MetaNetX (MNX) Equation : MNXR97814
{{#set: reconstruction category=manual}}
+
* RHEA:
{{#set: reconstruction source=reaction found from orthology but we fixed reversibility based on biological expertise}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18093 18093]
 +
* Reactome : REACT_R-ATH-73585
 +
* KEGG Reaction : R00978
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Dihydrouracil dehydrogenase (NADP)}}
 +
{{#set: gene associated=B471_RS0103590}}
 +
{{#set: in pathway=map00240|map01100|map00770|map00410|map00983}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:39, 21 March 2018

Reaction DURAD

  • direction:
    • REVERSIBLE
  • common name:
    • Dihydrouracil dehydrogenase (NADP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5,6-dihydrouracil[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c] <=> 1.0 Uracil[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 1.3.1.2
  • BioCyc : META:1.3.1.2-RXN
  • MetaNetX (MNX) Equation : MNXR97814
  • RHEA:
  • Reactome : REACT_R-ATH-73585
  • KEGG Reaction : R00978