Difference between revisions of "PIabc"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTDK1 CYTDK1] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP:cytidine 5'-phosphotransferas...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PIabc PIabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphate transport via ABC system...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTDK1 CYTDK1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PIabc PIabc] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ATP:cytidine 5'-phosphotransferase
+
** Phosphate transport via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[cytd]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[cmp]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[pi]][e] '''=>''' 1.0 [[adp]][c] '''+''' 2.0 [[pi]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Cytidine[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 CMP C9H12N3O8P[c] '''+''' 1.0 H+[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Phosphate[e] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 2.0 Phosphate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS23885]]
+
* Gene: [[B471_RS0119355]]
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** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-bsubtilis]]
 +
* Gene: [[B471_RS0119340]]
 +
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-bsubtilis]]
 +
* Gene: [[B471_RS0119345]]
 +
** Source: [[orthology-bsubtilis]]
 +
* Gene: [[B471_RS23690]]
 +
** Source: [[orthology-bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''68''' reactions found over '''244''' reactions in the full pathway
 
−
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 
−
** '''22''' reactions found over '''72''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24674 24674]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24440#1 24440#1]
−
* BioCyc : META:CYTIKIN-RXN
+
* MetaNetX (MNX) Equation : MNXR102870
−
* MetaNetX (MNX) Equation : MNXR97041
+
* EC Number : 3.6.3.27
−
* KEGG Reaction : R00513
+
* BioCyc : META:ABC-27-RXN
−
* EC Number : 2.7.1.213
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ATP:cytidine 5'-phosphotransferase}}
+
{{#set: common name=Phosphate transport via ABC system}}
−
{{#set: gene associated=B471_RS23885}}
+
{{#set: gene associated=B471_RS0119355|B471_RS0119340|B471_RS0119345|B471_RS23690}}
−
{{#set: in pathway=map01100|map00240|map00983}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Latest revision as of 15:39, 21 March 2018

Reaction PIabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphate transport via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 h2o[c] + 1.0 atp[c] + 1.0 pi[e] => 1.0 adp[c] + 2.0 pi[c] + 1.0 h[c]
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 Phosphate[e] => 1.0 ADP C10H12N5O10P2[c] + 2.0 Phosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR102870
  • EC Number : 3.6.3.27
  • BioCyc : META:ABC-27-RXN




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