Difference between revisions of "UAMAGS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD4x ALDD4x] == * direction: ** LEFT-TO-RIGHT * common name: ** Aldehyde dehydrogenase methylmal...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAMAGS UAMAGS] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP-N-acetylmuramoyl-L-alanyl-D-g...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD4x ALDD4x] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/UAMAGS UAMAGS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aldehyde dehydrogenase  methylmalonate semialdehyde  NAD
+
** UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[mmalsa__S]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[nad]][c] '''=>''' 2.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[mmal]][c]
+
** 1.0 [[glu__D]][c] '''+''' 1.0 [[uama]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[uamag]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 S  Methylmalonate semialdehyde C4H5O3[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 2.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Methylmalonate C4H4O4[c]
+
** 1.0 D-Glutamate[c] '''+''' 1.0 UDP-N-acetylmuramoyl-L-alanine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0115620]]
+
* Gene: [[B471_RS0109185]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-cljungdahlii]]
−
* [[B471_RS0119455]]
+
** Source: [[orthology-bsubtilis]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00471]]: [http://www.genome.jp/dbget-bin/www_bget?map00471 map00471]
 +
** '''3''' reactions found over '''10''' reactions in the full pathway
 +
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
 +
** '''14''' reactions found over '''27''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR95756
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16429 16429]
 +
* EC Number : 6.3.2.9
 +
* MetaNetX (MNX) Equation : MNXR105038
 +
* KEGG Reaction : R02783
 +
* BioCyc : META:UDP-NACMURALA-GLU-LIG-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Aldehyde dehydrogenase  methylmalonate semialdehyde  NAD }}
+
{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase}}
−
{{#set: gene associated=B471_RS0115620|B471_RS0119455}}
+
{{#set: gene associated=B471_RS0109185}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00471|map00550}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Latest revision as of 15:39, 21 March 2018

Reaction UAMAGS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glutamate[c] + 1.0 UDP-N-acetylmuramoyl-L-alanine[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 Phosphate[c] + 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 6.3.2.9
  • MetaNetX (MNX) Equation : MNXR105038
  • KEGG Reaction : R02783
  • BioCyc : META:UDP-NACMURALA-GLU-LIG-RXN




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