Difference between revisions of "EX thm"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RPE RPE] == * direction: ** REVERSIBLE * common name: ** Ribulose 5-phosphate 3-epimerase * Synonym...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EX_thm EX_thm] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With identi...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/RPE RPE] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/EX_thm EX_thm] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
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** LEFT-TO-RIGHT
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* common name:
+
−
** Ribulose 5-phosphate 3-epimerase
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ru5p__D]][c] '''<=>''' 1.0 [[xu5p__D]][c]
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** 1.0 [[thm]][e] '''=>'''  
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Ribulose 5-phosphate[c] '''<=>''' 1.0 D-Xylulose 5-phosphate[c]
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** 1.0 Thiamin[e] '''=>'''  
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS23765]]
 
−
** [[pantograph]]-[[cljungdahlii]]
 
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** [[pantograph]]-[[bsubtilis]]
 
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** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
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** '''472''' reactions found over '''2349''' reactions in the full pathway
 
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
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** '''212''' reactions found over '''1054''' reactions in the full pathway
 
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
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** '''101''' reactions found over '''715''' reactions in the full pathway
 
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* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
 
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** '''6''' reactions found over '''54''' reactions in the full pathway
 
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* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
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** '''51''' reactions found over '''220''' reactions in the full pathway
 
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* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
 
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** '''18''' reactions found over '''71''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''78''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
 
−
** '''20''' reactions found over '''69''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-missing_rxn_creator]]
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*** [[aferrooxidans]]
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*** Comment: [[reaction from orthology templates not found by pantograph]]
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*** [[cljungdahlii]]
+
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 5.1.3.1
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{{#set: direction=LEFT-TO-RIGHT}}
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* BioCyc : META:RIBULP3EPIM-RXN
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{{#set: in pathway=}}
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* MetaNetX (MNX) Equation : MNXR104083
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{{#set: reconstruction category=manual}}
−
* RHEA:
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{{#set: reconstruction source=manual-missing_rxn_creator}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13677 13677]
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{{#set: reconstruction comment=reaction from orthology templates not found by pantograph}}
−
* Reactome : REACT_R-ATH-199803
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−
* KEGG Reaction : R01529
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−
{{#set: direction=REVERSIBLE}}
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{{#set: common name=Ribulose 5-phosphate 3-epimerase}}
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−
{{#set: gene associated=B471_RS23765}}
+
−
{{#set: in pathway=map01100|map01110|map01120|map00040|map01200|map00710|map01230|map01130|map00030}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
+

Latest revision as of 15:39, 21 March 2018

Reaction EX_thm

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 thm[e] =>
  • With common name(s):
    • 1.0 Thiamin[e] =>

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=EX_thm&oldid=7668"