Difference between revisions of "FUM"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FBA2 FBA2] == * direction: ** REVERSIBLE * common name: ** D Fructose 1 phosphate D glyceraldehyde...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FUM FUM] == * direction: ** REVERSIBLE * common name: ** Fumarase * Synonym(s): == Reaction Formul...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/FBA2 FBA2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/FUM FUM] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** D Fructose 1 phosphate D glyceraldehyde 3 phosphate lyase
+
** Fumarase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[f1p]][c] '''<=>''' 1.0 [[dhap]][c] '''+''' 1.0 [[glyald]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[fum]][c] '''<=>''' 1.0 [[mal__L]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Fructose 1-phosphate[c] '''<=>''' 1.0 Dihydroxyacetone phosphate[c] '''+''' 1.0 D-Glyceraldehyde[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 Fumarate[c] '''<=>''' 1.0 L-Malate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0101615]]
+
* Gene: [[B471_RS0102435]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''101''' reactions found over '''715''' reactions in the full pathway
 
** '''101''' reactions found over '''715''' reactions in the full pathway
−
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
+
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
−
** '''11''' reactions found over '''63''' reactions in the full pathway
+
** '''51''' reactions found over '''220''' reactions in the full pathway
−
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
+
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
−
** '''18''' reactions found over '''71''' reactions in the full pathway
+
** '''22''' reactions found over '''163''' reactions in the full pathway
−
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
+
* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
−
** '''14''' reactions found over '''75''' reactions in the full pathway
+
** '''10''' reactions found over '''70''' reactions in the full pathway
−
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
+
−
** '''20''' reactions found over '''149''' reactions in the full pathway
+
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
** '''148''' reactions found over '''694''' reactions in the full pathway
−
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
+
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
−
** '''20''' reactions found over '''69''' reactions in the full pathway
+
** '''25''' reactions found over '''157''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aferrooxidans]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 4.2.1.2
 +
* BioCyc : META:FUMHYDR-RXN
 +
* MetaNetX (MNX) Equation : MNXR99705
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30851 30851]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12460 12460]
−
* MetaNetX (MNX) Equation : MNXR99460
+
* Reactome : REACT_R-ATH-451033
−
* KEGG Reaction : R02568
+
* KEGG Reaction : R01082
−
* EC Number : 4.1.2.13
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=D Fructose 1 phosphate D glyceraldehyde 3 phosphate lyase}}
+
{{#set: common name=Fumarase}}
−
{{#set: gene associated=B471_RS0101615}}
+
{{#set: gene associated=B471_RS0102435}}
−
{{#set: in pathway=map01100|map01110|map01120|map00051|map00710|map00680|map00010|map01130|map00030}}
+
{{#set: in pathway=map01100|map01110|map01120|map01200|map00620|map00020|map01130|map00720}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Latest revision as of 15:41, 21 March 2018

Reaction FUM

  • direction:
    • REVERSIBLE
  • common name:
    • Fumarase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 Fumarate[c] <=> 1.0 L-Malate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 4.2.1.2
  • BioCyc : META:FUMHYDR-RXN
  • MetaNetX (MNX) Equation : MNXR99705
  • RHEA:
  • Reactome : REACT_R-ATH-451033
  • KEGG Reaction : R01082




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