Difference between revisions of "SDPDS"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD32 ALDD32] == * direction: ** LEFT-TO-RIGHT * common name: ** Aldehyde dehydrogenase D Glucuro...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SDPDS SDPDS] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinyl-diaminopimelate desuccinyl...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/SDPDS SDPDS] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Succinyl-diaminopimelate desuccinylase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[sl26da]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[succ]][c] '''+''' 1.0 [[26dap_LL]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 N-Succinyl-LL-2,6-diaminoheptanedioate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Succinate[c] '''+''' 1.0 LL-2,6-Diaminoheptanedioate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[B471_RS0118440]] |
| − | ** [[ | + | ** Source: [[orthology-bsubtilis]] |
| − | * [[ | + | * Gene: [[B471_RS0119375]] |
| − | ** [[ | + | ** Source: [[orthology-aferrooxidans]] |
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] | ||
| + | ** '''78''' reactions found over '''228''' reactions in the full pathway | ||
| + | * [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] | ||
| + | ** '''10''' reactions found over '''34''' reactions in the full pathway | ||
| + | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| + | ** '''101''' reactions found over '''715''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-bsubtilis]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22608 22608] |
| − | * | + | * EC Number : 3.5.1.18 |
| − | * MetaNetX (MNX) Equation : | + | * MetaNetX (MNX) Equation : MNXR104300 |
| − | * KEGG Reaction : | + | * KEGG Reaction : R02734 |
| − | * | + | * BioCyc : META:SUCCDIAMINOPIMDESUCC-RXN |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Succinyl-diaminopimelate desuccinylase}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=B471_RS0118440|B471_RS0119375}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=map01100|map01230|map00300|map01120}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Latest revision as of 15:42, 21 March 2018
Contents
Reaction SDPDS
- direction:
- LEFT-TO-RIGHT
- common name:
- Succinyl-diaminopimelate desuccinylase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 N-Succinyl-LL-2,6-diaminoheptanedioate[c] + 1.0 H2O H2O[c] => 1.0 Succinate[c] + 1.0 LL-2,6-Diaminoheptanedioate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS0118440
- Source: orthology-bsubtilis
- Gene: B471_RS0119375
- Source: orthology-aferrooxidans
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map01230: map01230
- 78 reactions found over 228 reactions in the full pathway
- map00300: map00300
- 10 reactions found over 34 reactions in the full pathway
- map01120: map01120
- 101 reactions found over 715 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-bsubtilis
External links
- RHEA:
- EC Number : 3.5.1.18
- MetaNetX (MNX) Equation : MNXR104300
- KEGG Reaction : R02734
- BioCyc : META:SUCCDIAMINOPIMDESUCC-RXN
