Difference between revisions of "NPHS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMDS TMDS] == * direction: ** LEFT-TO-RIGHT * common name: ** Thymidylate synthase * Synonym(s): =...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NPHS NPHS] == * direction: ** LEFT-TO-RIGHT * common name: ** Naphthoate synthase * Synonym(s): ==...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TMDS TMDS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NPHS NPHS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Thymidylate synthase
+
** Naphthoate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[dump]][c] '''+''' 1.0 [[mlthf]][c] '''=>''' 1.0 [[dtmp]][c] '''+''' 1.0 [[dhf]][c]
+
** 1.0 [[sbzcoa]][c] '''=>''' 1.0 [[coa]][c] '''+''' 1.0 [[dhna]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 DUMP C9H11N2O8P[c] '''+''' 1.0 5,10-Methylenetetrahydrofolate[c] '''=>''' 1.0 DTMP C10H13N2O8P[c] '''+''' 1.0 7,8-Dihydrofolate[c]
+
** 1.0 O-Succinylbenzoyl-CoA[c] '''=>''' 1.0 Coenzyme A[c] '''+''' 1.0 1,4-Dihydroxy-2-naphthoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[B471_RS0108505]]
 +
** Source: [[orthology-bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''68''' reactions found over '''244''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
+
* [[map00130]]: [http://www.genome.jp/dbget-bin/www_bget?map00130 map00130]
** '''13''' reactions found over '''65''' reactions in the full pathway
+
** '''6''' reactions found over '''40''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12104 12104]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15525 15525]
* MetaNetX (MNX) Equation : MNXR104889
+
* MetaNetX (MNX) Equation : MNXR102012
* KEGG Reaction : R02101
+
* KEGG Reaction : R04150
* EC Number : 2.1.1.45
+
* EC Number : 4.1.3.36
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Thymidylate synthase}}
+
{{#set: common name=Naphthoate synthase}}
{{#set: in pathway=map00240|map01100|map00670}}
+
{{#set: gene associated=B471_RS0108505}}
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map00130|map01110}}
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:42, 21 March 2018

Reaction NPHS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Naphthoate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 O-Succinylbenzoyl-CoA[c] => 1.0 Coenzyme A[c] + 1.0 1,4-Dihydroxy-2-naphthoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR102012
  • KEGG Reaction : R04150
  • EC Number : 4.1.3.36