Difference between revisions of "CYTD"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/pro__L pro__L] == * common name: ** L-Proline * Synonym(s): == Reaction(s) known to consume...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTD CYTD] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytidine deaminase * Synonym(s): ==...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/pro__L pro__L] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTD CYTD] ==
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* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** L-Proline
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** Cytidine deaminase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[PROt2r_CUT]]
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* With identifiers:
* [[PRO1x]]
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** 1.0 [[h]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[cytd]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[uri]][c]
* [[PROt4]]
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* With common name(s):
* [[BIOMASS]]
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** 1.0 H+[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Cytidine[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Uridine[c]
* [[EX_pro__L]]
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== Reaction(s) known to produce the compound ==
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== Genes associated with this reaction  ==
* [[PROt2r_CUT]]
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Genes have been associated with this reaction based on different elements listed below.
* [[P5CR]]
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* Gene: [[B471_RS0118750]]
* [[PROt4]]
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** Source: [[orthology-cljungdahlii]]
== Reaction(s) of unknown directionality ==
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** Source: [[orthology-bsubtilis]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
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** '''68''' reactions found over '''244''' reactions in the full pathway
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* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
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** '''22''' reactions found over '''72''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-cljungdahlii]]
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*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: common name=L-Proline}}
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* RHEA:
{{#set: consumed by=PROt2r_CUT|PRO1x|PROt4|BIOMASS|EX_pro__L}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16069 16069]
{{#set: produced by=PROt2r_CUT|P5CR|PROt4}}
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* EC Number : 3.5.4.5
 +
* MetaNetX (MNX) Equation : MNXR97039
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* KEGG Reaction : R01878
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* BioCyc : META:CYTIDEAM2-RXN
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Cytidine deaminase}}
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{{#set: gene associated=B471_RS0118750}}
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{{#set: in pathway=map01100|map00240|map00983}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:42, 21 March 2018

Reaction CYTD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cytidine deaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 H2O H2O[c] + 1.0 Cytidine[c] => 1.0 Ammonium[c] + 1.0 Uridine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 3.5.4.5
  • MetaNetX (MNX) Equation : MNXR97039
  • KEGG Reaction : R01878
  • BioCyc : META:CYTIDEAM2-RXN