Difference between revisions of "IGPS"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EX_gal EX_gal] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With identi...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/IGPS IGPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Indole-3-glycerol-phosphate synthase...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/IGPS IGPS] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** Indole-3-glycerol-phosphate synthase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[h]][c] '''+''' 1.0 [[2cpr5p]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[3ig3p]][c] '''+''' 1.0 [[co2]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 D- | + | ** 1.0 H+[c] '''+''' 1.0 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 C'-(3-Indolyl)-glycerol 3-phosphate[c] '''+''' 1.0 CO2 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[B471_RS0109415]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''148''' reactions found over '''694''' reactions in the full pathway | ||
| + | * [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400] | ||
| + | ** '''17''' reactions found over '''59''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''212''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] | ||
| + | ** '''78''' reactions found over '''228''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-cljungdahlii]] |
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23476 23476] | ||
| + | * EC Number : 4.1.1.48 | ||
| + | * MetaNetX (MNX) Equation : MNXR100814 | ||
| + | * KEGG Reaction : R03508 | ||
| + | * BioCyc : META:IGPSYN-RXN | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: in pathway=}} | + | {{#set: common name=Indole-3-glycerol-phosphate synthase}} |
| − | {{#set: reconstruction category= | + | {{#set: gene associated=B471_RS0109415}} |
| − | {{#set: reconstruction source= | + | {{#set: in pathway=map01100|map01130|map00400|map01110|map01230}} |
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-cljungdahlii|orthology-aferrooxidans}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:42, 21 March 2018
Contents
Reaction IGPS
- direction:
- LEFT-TO-RIGHT
- common name:
- Indole-3-glycerol-phosphate synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 H+[c] + 1.0 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate[c] => 1.0 H2O H2O[c] + 1.0 C'-(3-Indolyl)-glycerol 3-phosphate[c] + 1.0 CO2 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS0109415
- Source: orthology-cljungdahlii
- Source: orthology-aferrooxidans
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map01130: map01130
- 148 reactions found over 694 reactions in the full pathway
- map00400: map00400
- 17 reactions found over 59 reactions in the full pathway
- map01110: map01110
- 212 reactions found over 1054 reactions in the full pathway
- map01230: map01230
- 78 reactions found over 228 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- RHEA:
- EC Number : 4.1.1.48
- MetaNetX (MNX) Equation : MNXR100814
- KEGG Reaction : R03508
- BioCyc : META:IGPSYN-RXN
