Difference between revisions of "GPDDA4"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XAND XAND] == * direction: ** LEFT-TO-RIGHT * common name: ** Xanthine dehydrogenase * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA4 GPDDA4] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerophosphodiester phosphodies...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/XAND XAND] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA4 GPDDA4] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Xanthine dehydrogenase
+
** Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nad]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[xan]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[urate]][c] '''+''' 1.0 [[nadh]][c]
+
** 1.0 [[g3pg]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[glyc3p]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[glyc]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Xanthine[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Urate C5H4N4O3[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
+
** 1.0 Glycerophosphoglycerol[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Glycerol 3-phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Glycerol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0112575]]
+
* Gene: [[B471_RS24705]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-cljungdahlii]]
−
* [[B471_RS0103700]]
+
** Source: [[orthology-bsubtilis]]
−
** [[pantograph]]-[[bsubtilis]]
+
−
* [[B471_RS23125]]
+
−
** [[pantograph]]-[[bsubtilis]]
+
−
* [[B471_RS22425]]
+
−
** [[pantograph]]-[[bsubtilis]]
+
−
* [[B471_RS0103670]]
+
−
** [[pantograph]]-[[bsubtilis]]
+
−
* [[B471_RS0116365]]
+
−
** [[pantograph]]-[[bsubtilis]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''36''' reactions found over '''134''' reactions in the full pathway
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
−
** '''64''' reactions found over '''298''' reactions in the full pathway
+
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
−
** '''101''' reactions found over '''715''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.17.1.4
+
* MetaNetX (MNX) Equation : MNXR100413
−
* BioCyc : META:RXN0-901
+
* EC Number : 3.1.4.46
−
* MetaNetX (MNX) Equation : MNXR105225
+
* BioCyc : META:RXN-14073
−
* RHEA:
+
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16669 16669]
+
−
* Reactome : REACT_R-GGA-421158
+
−
* KEGG Reaction : R02103
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Xanthine dehydrogenase}}
+
{{#set: common name=Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol)}}
−
{{#set: gene associated=B471_RS0112575|B471_RS0103700|B471_RS23125|B471_RS22425|B471_RS0103670|B471_RS0116365}}
+
{{#set: gene associated=B471_RS24705}}
−
{{#set: in pathway=map01100|map00230|map01120}}
+
{{#set: in pathway=map00564}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Latest revision as of 15:43, 21 March 2018

Reaction GPDDA4

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Glycerophosphoglycerol[c] + 1.0 H2O H2O[c] => 1.0 Glycerol 3-phosphate[c] + 1.0 H+[c] + 1.0 Glycerol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100413
  • EC Number : 3.1.4.46
  • BioCyc : META:RXN-14073




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