Difference between revisions of "MALS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/IPPMIa_AFE IPPMIa_AFE] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydratas...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MALS MALS] == * direction: ** LEFT-TO-RIGHT * common name: ** Malate synthase * Synonym(s): == Rea...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/IPPMIa_AFE IPPMIa_AFE] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/MALS MALS] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-isopropylmalate dehydratase
+
** Malate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[3c3hmp]][c] '''<=>''' 1.0 [[3c2hmp]][c]
+
** 1.0 [[accoa]][c] '''+''' 1.0 [[glx]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[coa]][c] '''+''' 1.0 [[mal__L]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 3-Carboxy-3-hydroxy-4-methylpentanoate[c] '''<=>''' 1.0 3-Carboxy-2-hydroxy-4-methylpentanoate[c]
+
** 1.0 Acetyl-CoA[c] '''+''' 1.0 Glyoxylate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Coenzyme A[c] '''+''' 1.0 L-Malate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0105520]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
−
* [[B471_RS0105525]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 +
** '''23''' reactions found over '''129''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''51''' reactions found over '''220''' reactions in the full pathway
 +
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 +
** '''22''' reactions found over '''163''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-reaction_to_add_delete]]
−
*** [[aferrooxidans]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=3-isopropylmalate dehydratase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18181 18181]
−
{{#set: gene associated=B471_RS0105520|B471_RS0105525}}
+
* BioCyc : META:MALSYN-RXN
−
{{#set: in pathway=}}
+
* MetaNetX (MNX) Equation : MNXR101347
−
{{#set: reconstruction category=orthology}}
+
* KEGG Reaction : R00472
−
{{#set: reconstruction tool=pantograph}}
+
* EC Number : 2.3.3.9
−
{{#set: reconstruction source=aferrooxidans}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Malate synthase}}
 +
{{#set: in pathway=map01100|map00630|map01110|map01120|map01200|map00620}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=manual-reaction_to_add_delete}}
 +
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}

Latest revision as of 15:43, 21 March 2018

Reaction MALS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Malate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Acetyl-CoA[c] + 1.0 Glyoxylate[c] + 1.0 H2O H2O[c] => 1.0 H+[c] + 1.0 Coenzyme A[c] + 1.0 L-Malate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:MALSYN-RXN
  • MetaNetX (MNX) Equation : MNXR101347
  • KEGG Reaction : R00472
  • EC Number : 2.3.3.9




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