Difference between revisions of "PMDPHT"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MAN1PT_CUT MAN1PT_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PMDPHT PMDPHT] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyrimidine phosphatase * Synonym(...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MAN1PT_CUT MAN1PT_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PMDPHT PMDPHT] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Pyrimidine phosphatase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[gtp]][c] '''+''' 1.0 [[man1p]][c] '''=>''' 1.0 [[gdpmann]][c] '''+''' 1.0 [[ppi]][c]
+
** 1.0 [[5aprbu]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[4r5au]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 GTP C10H12N5O14P3[c] '''+''' 1.0 D-Mannose 1-phosphate[c] '''=>''' 1.0 GDP-D-mannose[c] '''+''' 1.0 Diphosphate[c]
+
** 1.0 5-Amino-6-(5'-phosphoribitylamino)uracil[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 4-(1-D-Ribitylamino)-5-aminouracil[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[B471_RS0107610]]
 
** MANUAL
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00740]]: [http://www.genome.jp/dbget-bin/www_bget?map00740 map00740]
 +
** '''8''' reactions found over '''38''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[manual]]
** [[reactions originally found with orthology but modified following biological expertise]]
+
** Source: [[manual-reaction_to_add_delete]]
 +
*** Comment: [[reaction added from literature evidence or biological expertise]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25197 25197]
 +
* BioCyc : META:RIBOPHOSPHAT-RXN
 +
* MetaNetX (MNX) Equation : MNXR96145
 +
* KEGG Reaction : R07280
 +
* EC Number : 3.1.3.-
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: gene associated=B471_RS0107610}}
+
{{#set: common name=Pyrimidine phosphatase}}
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map01110|map00740}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
{{#set: reconstruction source=reactions originally found with orthology but modified following biological expertise}}
+
{{#set: reconstruction source=manual-reaction_to_add_delete}}
 +
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}

Latest revision as of 15:44, 21 March 2018

Reaction PMDPHT

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyrimidine phosphatase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5-Amino-6-(5'-phosphoribitylamino)uracil[c] + 1.0 H2O H2O[c] => 1.0 Phosphate[c] + 1.0 4-(1-D-Ribitylamino)-5-aminouracil[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RIBOPHOSPHAT-RXN
  • MetaNetX (MNX) Equation : MNXR96145
  • KEGG Reaction : R07280
  • EC Number : 3.1.3.-