Difference between revisions of "PSCVT"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DALAOX DALAOX] == * direction: ** LEFT-TO-RIGHT * common name: ** D amino acid oxidase * Synonym(s)...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PSCVT PSCVT] == * direction: ** REVERSIBLE * common name: ** 3-phosphoshikimate 1-carboxyvinyltrans...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DALAOX DALAOX] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PSCVT PSCVT] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** D amino acid oxidase
+
** 3-phosphoshikimate 1-carboxyvinyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ala__D]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[o2]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[pyr]][c] '''+''' 1.0 [[h2o2]][c]
+
** 1.0 [[skm5p]][c] '''+''' 1.0 [[pep]][c] '''<=>''' 1.0 [[pi]][c] '''+''' 1.0 [[3psme]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Alanine[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 O2 O2[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Pyruvate[c] '''+''' 1.0 Hydrogen peroxide[c]
+
** 1.0 Shikimate 5-phosphate[c] '''+''' 1.0 Phosphoenolpyruvate[c] '''<=>''' 1.0 Phosphate[c] '''+''' 1.0 5-O-(1-Carboxyvinyl)-3-phosphoshikimate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0117705]]
+
* Gene: [[B471_RS21780]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-bsubtilis]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00311]]: [http://www.genome.jp/dbget-bin/www_bget?map00311 map00311]
+
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
−
* [[map00472]]: [http://www.genome.jp/dbget-bin/www_bget?map00472 map00472]
+
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
−
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
+
−
** '''19''' reactions found over '''149''' reactions in the full pathway
+
−
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
+
−
** '''24''' reactions found over '''133''' reactions in the full pathway
+
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
 +
** '''17''' reactions found over '''59''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22688 22688]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21256 21256]
−
* BioCyc : META:RXN-8672
+
* EC Number : 2.5.1.19
−
* MetaNetX (MNX) Equation : MNXR97134
+
* MetaNetX (MNX) Equation : MNXR103226
−
* KEGG Reaction : R05861
+
* KEGG Reaction : R03460
−
* EC Number : 1.4.3.19
+
* BioCyc : META:2.5.1.19-RXN
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=D amino acid oxidase}}
+
{{#set: common name=3-phosphoshikimate 1-carboxyvinyltransferase}}
−
{{#set: gene associated=B471_RS0117705}}
+
{{#set: gene associated=B471_RS21780}}
−
{{#set: in pathway=map01100|map00311|map00472|map00330|map00260|map01130}}
+
{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Latest revision as of 15:44, 21 March 2018

Reaction PSCVT

  • direction:
    • REVERSIBLE
  • common name:
    • 3-phosphoshikimate 1-carboxyvinyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Shikimate 5-phosphate[c] + 1.0 Phosphoenolpyruvate[c] <=> 1.0 Phosphate[c] + 1.0 5-O-(1-Carboxyvinyl)-3-phosphoshikimate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.5.1.19
  • MetaNetX (MNX) Equation : MNXR103226
  • KEGG Reaction : R03460
  • BioCyc : META:2.5.1.19-RXN




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