Difference between revisions of "IPPMIa AFE"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK3 NDPK3] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:CDP...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/IPPMIa_AFE IPPMIa_AFE] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydratas...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK3 NDPK3] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/IPPMIa_AFE IPPMIa_AFE] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Nucleoside-diphosphate kinase (ATP:CDP)
+
** 3-isopropylmalate dehydratase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[cdp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[ctp]][c]
+
** 1.0 [[3c3hmp]][c] '''<=>''' 1.0 [[3c2hmp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 CDP C9H12N3O11P2[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 CTP C9H12N3O14P3[c]
+
** 1.0 3-Carboxy-3-hydroxy-4-methylpentanoate[c] '''<=>''' 1.0 3-Carboxy-2-hydroxy-4-methylpentanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0100900]]
+
* Gene: [[B471_RS0105520]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-aferrooxidans]]
−
** [[pantograph]]-[[aferrooxidans]]
+
* Gene: [[B471_RS0105525]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''68''' reactions found over '''244''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
−
** '''64''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aferrooxidans]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25237 25237]
 
−
* BioCyc : META:CDPKIN-RXN
 
−
* MetaNetX (MNX) Equation : MNXR101936
 
−
* KEGG Reaction : R00570
 
−
* EC Number : 2.7.4.6
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Nucleoside-diphosphate kinase (ATP:CDP)}}
+
{{#set: common name=3-isopropylmalate dehydratase}}
−
{{#set: gene associated=B471_RS0100900}}
+
{{#set: gene associated=B471_RS0105520|B471_RS0105525}}
−
{{#set: in pathway=map00240|map01130|map01110|map01100|map00230}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|bsubtilis}}
 

Latest revision as of 15:45, 21 March 2018

Reaction IPPMIa_AFE

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 3-Carboxy-3-hydroxy-4-methylpentanoate[c] <=> 1.0 3-Carboxy-2-hydroxy-4-methylpentanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=IPPMIa_AFE&oldid=8133"