Difference between revisions of "METSR R1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TRPS1 TRPS1] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase (indoleglycerol...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/METSR_R1 METSR_R1] == * direction: ** LEFT-TO-RIGHT * common name: ** L methionine R oxide reductas...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/TRPS1 TRPS1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/METSR_R1 METSR_R1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Tryptophan synthase (indoleglycerol phosphate)
+
** L methionine R oxide reductase  trdrd
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ser__L]][c] '''+''' 1.0 [[3ig3p]][c] '''=>''' 1.0 [[trp__L]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[g3p]][c]
+
** 1.0 [[trdrd]][c] '''+''' 1.0 [[metox__R]][c] '''=>''' 1.0 [[trdox]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[met__L]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Serine[c] '''+''' 1.0 C'-(3-Indolyl)-glycerol 3-phosphate[c] '''=>''' 1.0 L-Tryptophan[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Glyceraldehyde 3-phosphate[c]
+
** 1.0 Reduced thioredoxin[c] '''+''' 1.0 L methionine R oxide C5H11NO3S[c] '''=>''' 1.0 Oxidized thioredoxin[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 L-Methionine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0109425]]
+
* Gene: [[B471_RS0104260]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[orthology-bsubtilis]]
−
** [[pantograph]]-[[bsubtilis]]
+
−
* [[B471_RS0109430]]
+
−
** [[pantograph]]-[[cljungdahlii]]
+
−
** [[pantograph]]-[[bsubtilis]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''78''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 
−
** '''24''' reactions found over '''133''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
 
−
** '''17''' reactions found over '''59''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-bsubtilis]]
−
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR101485
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10532 10532]
+
−
* BioCyc : META:TRYPSYN-RXN
+
−
* MetaNetX (MNX) Equation : MNXR104343
+
−
* KEGG Reaction : R02722
+
−
* EC Number : 4.2.1.20
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Tryptophan synthase (indoleglycerol phosphate)}}
+
{{#set: common name=L methionine R oxide reductase  trdrd }}
−
{{#set: gene associated=B471_RS0109425|B471_RS0109430}}
+
{{#set: gene associated=B471_RS0104260}}
−
{{#set: in pathway=map01100|map01110|map01230|map00260|map01130|map00400}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=cljungdahlii|bsubtilis}}
 

Latest revision as of 15:46, 21 March 2018

Reaction METSR_R1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • L methionine R oxide reductase trdrd
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Reduced thioredoxin[c] + 1.0 L methionine R oxide C5H11NO3S[c] => 1.0 Oxidized thioredoxin[c] + 1.0 H2O H2O[c] + 1.0 L-Methionine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR101485




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