Difference between revisions of "IGPDH"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RPI RPI] == * direction: ** REVERSIBLE * common name: ** Ribose-5-phosphate isomerase * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/IGPDH IGPDH] == * direction: ** LEFT-TO-RIGHT * common name: ** Imidazoleglycerol-phosphate dehydra...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/RPI RPI] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/IGPDH IGPDH] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Ribose-5-phosphate isomerase
+
** Imidazoleglycerol-phosphate dehydratase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[r5p]][c] '''<=>''' 1.0 [[ru5p__D]][c]
+
** 1.0 [[eig3p]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[imacp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Alpha-D-Ribose 5-phosphate[c] '''<=>''' 1.0 D-Ribulose 5-phosphate[c]
+
** 1.0 D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 3-(Imidazol-4-yl)-2-oxopropyl phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0116940]]
+
* Gene: [[B471_RS0118335]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[orthology-cljungdahlii]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-aferrooxidans]]
−
* [[B471_RS0116500]]
+
−
** [[pantograph]]-[[aferrooxidans]]
+
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00340]]: [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340]
 +
** '''13''' reactions found over '''90''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
−
** '''101''' reactions found over '''715''' reactions in the full pathway
+
** '''78''' reactions found over '''228''' reactions in the full pathway
−
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
+
−
** '''11''' reactions found over '''63''' reactions in the full pathway
+
−
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
+
−
** '''18''' reactions found over '''71''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''148''' reactions found over '''694''' reactions in the full pathway
+
−
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
+
−
** '''20''' reactions found over '''69''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[cljungdahlii]]
+
** Source: [[orthology-aferrooxidans]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR104084
+
* RHEA:
−
* EC Number : 5.3.1.6
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11040 11040]
−
{{#set: direction=REVERSIBLE}}
+
* EC Number : 4.2.1.19
−
{{#set: common name=Ribose-5-phosphate isomerase}}
+
* MetaNetX (MNX) Equation : MNXR100813
−
{{#set: gene associated=B471_RS0116940|B471_RS0116500}}
+
* KEGG Reaction : R03457
−
{{#set: in pathway=map01100|map01110|map01120|map00051|map00710|map01130|map00030}}
+
* BioCyc : META:IMIDPHOSDEHYD-RXN
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Imidazoleglycerol-phosphate dehydratase}}
 +
{{#set: gene associated=B471_RS0118335}}
 +
{{#set: in pathway=map01100|map00340|map01110|map01230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
 

Latest revision as of 15:46, 21 March 2018

Reaction IGPDH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Imidazoleglycerol-phosphate dehydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate[c] => 1.0 H2O H2O[c] + 1.0 3-(Imidazol-4-yl)-2-oxopropyl phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 4.2.1.19
  • MetaNetX (MNX) Equation : MNXR100813
  • KEGG Reaction : R03457
  • BioCyc : META:IMIDPHOSDEHYD-RXN




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=IGPDH&oldid=8250"