Difference between revisions of "SDPTA"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EAR161x EAR161x] == * direction: ** LEFT-TO-RIGHT * common name: ** Enoyl-[acyl-carrier-protein] re...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SDPTA SDPTA] == * direction: ** REVERSIBLE * common name: ** Succinyldiaminopimelate transaminase *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/EAR161x EAR161x] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SDPTA SDPTA] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:1)
+
** Succinyldiaminopimelate transaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[t3c9palmeACP]][c] '''=>''' 1.0 [[hdeACP]][c] '''+''' 1.0 [[nad]][c]
+
** 1.0 [[sl26da]][c] '''+''' 1.0 [[akg]][c] '''<=>''' 1.0 [[sl2a6o]][c] '''+''' 1.0 [[glu__L]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Trans-3-cis-9-palmitoleoyl-[acyl-carrier protein][c] '''=>''' 1.0 Cis-hexadec-9-enoyl-[acyl-carrier protein] (n-C16:1)[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c]
+
** 1.0 N-Succinyl-LL-2,6-diaminoheptanedioate[c] '''+''' 1.0 2-Oxoglutarate[c] '''<=>''' 1.0 N-Succinyl-2-L-amino-6-oxoheptanedioate[c] '''+''' 1.0 L-Glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS22805]]
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* Gene: [[B471_RS0117530]]
** [[pantograph]]-[[cljungdahlii]]
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** Source: [[orthology-cljungdahlii]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''472''' reactions found over '''2349''' reactions in the full pathway
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** '''471''' reactions found over '''2349''' reactions in the full pathway
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
** '''54''' reactions found over '''160''' reactions in the full pathway
+
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
 +
** '''10''' reactions found over '''34''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR97857
+
* RHEA:
* EC Number : 1.3.1.9
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11960 11960]
{{#set: direction=LEFT-TO-RIGHT}}
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* EC Number : 2.6.1.17
{{#set: common name=Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:1)}}
+
* MetaNetX (MNX) Equation : MNXR104301
{{#set: gene associated=B471_RS22805}}
+
* KEGG Reaction : R04475
{{#set: in pathway=map01100|map00061}}
+
* BioCyc : META:SUCCINYLDIAMINOPIMTRANS-RXN
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Succinyldiaminopimelate transaminase}}
 +
{{#set: gene associated=B471_RS0117530}}
 +
{{#set: in pathway=map01100|map01120|map00300|map01230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=cljungdahlii}}
 

Latest revision as of 15:46, 21 March 2018

Reaction SDPTA

  • direction:
    • REVERSIBLE
  • common name:
    • Succinyldiaminopimelate transaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 N-Succinyl-LL-2,6-diaminoheptanedioate[c] + 1.0 2-Oxoglutarate[c] <=> 1.0 N-Succinyl-2-L-amino-6-oxoheptanedioate[c] + 1.0 L-Glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.6.1.17
  • MetaNetX (MNX) Equation : MNXR104301
  • KEGG Reaction : R04475
  • BioCyc : META:SUCCINYLDIAMINOPIMTRANS-RXN