Difference between revisions of "ADSL2r CUT"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGM PGM] == * direction: ** REVERSIBLE * common name: ** Phosphoglycerate mutase * Synonym(s): ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADSL2r_CUT ADSL2r_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGM PGM] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ADSL2r_CUT ADSL2r_CUT] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** Phosphoglycerate mutase
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[2pg]][c] '''<=>''' 1.0 [[3pg]][c]
+
** 1.0 [[25aics]][c] '''=>''' 1.0 [[aicar]][c] '''+''' 1.0 [[fum]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Glycerate 2-phosphate[c] '''<=>''' 1.0 3-Phospho-D-glycerate[c]
+
** 1.0 (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate[c] '''=>''' 1.0 5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide[c] '''+''' 1.0 Fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0119315]]
+
* Gene: [[B471_RS0105285]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[manual-missing_rxn_creator]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''101''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''51''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''78''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
 
−
** '''14''' reactions found over '''75''' reactions in the full pathway
 
−
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 
−
** '''20''' reactions found over '''149''' reactions in the full pathway
 
−
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 
−
** '''24''' reactions found over '''133''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-missing_rxn_creator]]
−
*** [[cljungdahlii]]
+
*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 5.4.2.1
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* BioCyc : META:3PGAREARR-RXN
+
{{#set: gene associated=B471_RS0105285}}
−
* MetaNetX (MNX) Equation : MNXR102547
+
{{#set: in pathway=}}
−
* RHEA:
+
{{#set: reconstruction category=manual}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15901 15901]
+
{{#set: reconstruction source=manual-missing_rxn_creator}}
−
* Reactome : REACT_R-ATH-71445
+
{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
−
* KEGG Reaction : R01518
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Phosphoglycerate mutase}}
+
−
{{#set: gene associated=B471_RS0119315}}
+
−
{{#set: in pathway=map01100|map01110|map01120|map01200|map01230|map00680|map00010|map00260|map01130}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=cljungdahlii}}
+

Latest revision as of 16:46, 21 March 2018

Reaction ADSL2r_CUT

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate[c] => 1.0 5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide[c] + 1.0 Fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=ADSL2r_CUT&oldid=8296"