Difference between revisions of "SERTRS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FE3t FE3t] == * direction: ** REVERSIBLE * common name: ** Ferric iron uptake, plasma membrane * Sy...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SERTRS SERTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Seryl-tRNA synthetase * Synonym(s...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/FE3t FE3t] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SERTRS SERTRS] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Ferric iron uptake, plasma membrane
+
** Seryl-tRNA synthetase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[fe3]][e] '''<=>''' 1.0 [[fe3]][c]
+
** 1.0 [[ser__L]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[trnaser]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[sertrna]][c] '''+''' 1.0 [[ppi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Fe3+[e] '''<=>''' 1.0 Fe3+[c]
+
** 1.0 L-Serine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 TRNA(Ser)[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 L-Seryl-tRNA(Ser)[c] '''+''' 1.0 Diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[B471_RS0112265]]
 +
** Source: [[orthology-cljungdahlii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
 +
** '''7''' reactions found over '''49''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR104350
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34971 34971]
+
* KEGG Reaction : R03662
* Reactome : REACT_R-BTA-442368
+
* EC Number : 6.1.1.11
* MetaNetX (MNX) Equation : MNXR99522
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Seryl-tRNA synthetase}}
{{#set: common name=Ferric iron uptake, plasma membrane}}
+
{{#set: gene associated=B471_RS0112265}}
{{#set: in pathway=}}
+
{{#set: in pathway=map00970}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: reconstruction source=orthology-cljungdahlii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:47, 21 March 2018

Reaction SERTRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Seryl-tRNA synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Serine[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 TRNA(Ser)[c] => 1.0 AMP C10H12N5O7P[c] + 1.0 L-Seryl-tRNA(Ser)[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR104350
  • KEGG Reaction : R03662
  • EC Number : 6.1.1.11