Difference between revisions of "HISTD1 CUT"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UGMDDS UGMDDS] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP-N-acetylmuramoyl-L-alanyl-D-g...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HISTD1_CUT HISTD1_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/UGMDDS UGMDDS] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/HISTD1_CUT HISTD1_CUT] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[alaala]][c] '''+''' 1.0 [[ugmd]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[ugmda]][c]
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** 1.0 [[histd]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[hist__L]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 D-Alanyl-D-alanine[c] '''+''' 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c]
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** 1.0 L-Histidinol[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 L-Histidinal[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS21735]]
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* Gene: [[B471_RS0118330]]
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** [[pantograph]]-[[cljungdahlii]]
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** Source: [[manual-missing_rxn_creator]]
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** [[pantograph]]-[[bsubtilis]]
+
−
** [[pantograph]]-[[aferrooxidans]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
 
−
** '''14''' reactions found over '''27''' reactions in the full pathway
 
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* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
 
−
** '''10''' reactions found over '''34''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
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** Source: [[manual-missing_rxn_creator]]
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*** [[aferrooxidans]]
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*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
−
*** [[cljungdahlii]]
+
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR105094
 
−
* EC Number : 6.3.2.10
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase}}
+
{{#set: gene associated=B471_RS0118330}}
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{{#set: gene associated=B471_RS21735}}
+
{{#set: in pathway=}}
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{{#set: in pathway=map01100|map00550|map00300}}
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{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=manual-missing_rxn_creator}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
+

Latest revision as of 15:47, 21 March 2018

Reaction HISTD1_CUT

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Histidinol[c] + 1.0 Nicotinamide adenine dinucleotide[c] => 1.0 L-Histidinal[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=HISTD1_CUT&oldid=8367"