Difference between revisions of "RIBFLVt2 CUT"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD2 NTD2] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (UMP) * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RIBFLVt2_CUT RIBFLVt2_CUT] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * Wi...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD2 NTD2] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/RIBFLVt2_CUT RIBFLVt2_CUT] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
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** REVERSIBLE
* common name:
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** 5'-nucleotidase (UMP)
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[ump]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[uri]][c]
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** 1.0 [[h]][e] '''+''' 1.0 [[ribflv]][e] '''<=>''' 1.0 [[ribflv]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[c] '''+''' 1.0 UMP C9H11N2O9P[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Uridine[c]
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** 1.0 H+[e] '''+''' 1.0 Riboflavin C17H20N4O6[e] '''<=>''' 1.0 Riboflavin C17H20N4O6[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[B471_RS0110685]]
 
** [[pantograph]]-[[bsubtilis]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''68''' reactions found over '''244''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''64''' reactions found over '''298''' reactions in the full pathway
 
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
 
** '''17''' reactions found over '''97''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-missing_rxn_creator]]
*** [[bsubtilis]]
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*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=REVERSIBLE}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29359 29359]
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{{#set: in pathway=}}
* BioCyc : META:RXN-14025
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{{#set: reconstruction category=manual}}
* MetaNetX (MNX) Equation : MNXR102032
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{{#set: reconstruction source=manual-missing_rxn_creator}}
* KEGG Reaction : R00963
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{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
* EC Number : 3.1.3.5
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=5'-nucleotidase (UMP)}}
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{{#set: gene associated=B471_RS0110685}}
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{{#set: in pathway=map01100|map00240|map01110|map00230|map00760}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=bsubtilis}}
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Latest revision as of 15:47, 21 March 2018

Reaction RIBFLVt2_CUT

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[e] + 1.0 Riboflavin C17H20N4O6[e] <=> 1.0 Riboflavin C17H20N4O6[c] + 1.0 H+[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links