Difference between revisions of "GPDDA2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MPTG2ex MPTG2ex] == * direction: ** LEFT-TO-RIGHT * common name: ** Murein polymerizing transglycos...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA2 GPDDA2] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerophosphodiester phosphodies...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MPTG2ex MPTG2ex] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA2 GPDDA2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Murein polymerizing transglycosylase 2 (three linked units)
+
** Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[murein5p5p]][e] '''+''' 1.0 [[uaagmda]][e] '''=>''' 1.0 [[h]][e] '''+''' 1.0 [[udcpdp]][e] '''+''' 1.0 [[murein5p5p5p]][e]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[g3pe]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[glyc3p]][c] '''+''' 1.0 [[etha]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Two linked disacharide pentapeptide murein units (uncrosslinked, middle of chain)[e] '''+''' 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-ala-D-glu-meso-2,6-diaminopimeloyl-D-ala-D-ala[e] '''=>''' 1.0 H+[e] '''+''' 1.0 Undecaprenyl diphosphate[e] '''+''' 1.0 Three linked disacharide pentapeptide murein units (uncrosslinked, middle of chain)[e]
+
** 1.0 H2O H2O[c] '''+''' 1.0 Sn-Glycero-3-phosphoethanolamine[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Glycerol 3-phosphate[c] '''+''' 1.0 Ethanolamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0109660]]
+
* Gene: [[B471_RS24705]]
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[orthology-cljungdahlii]]
* [[B471_RS0113655]]
+
** Source: [[orthology-bsubtilis]]
** [[pantograph]]-[[cljungdahlii]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
 +
** '''36''' reactions found over '''134''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR101733
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29319 29319]
 +
* EC Number : 3.1.4.2
 +
* MetaNetX (MNX) Equation : MNXR100411
 +
* KEGG Reaction : R01470
 +
* BioCyc : META:RXN-14160
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Murein polymerizing transglycosylase 2 (three linked units)}}
+
{{#set: common name=Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)}}
{{#set: gene associated=B471_RS0109660|B471_RS0113655}}
+
{{#set: gene associated=B471_RS24705}}
{{#set: in pathway=}}
+
{{#set: in pathway=map00564}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=cljungdahlii}}
 

Latest revision as of 15:47, 21 March 2018

Reaction GPDDA2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 Sn-Glycero-3-phosphoethanolamine[c] => 1.0 H+[c] + 1.0 Glycerol 3-phosphate[c] + 1.0 Ethanolamine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 3.1.4.2
  • MetaNetX (MNX) Equation : MNXR100411
  • KEGG Reaction : R01470
  • BioCyc : META:RXN-14160