Difference between revisions of "Map00410"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DXPS DXPS] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-deoxy-D-xylulose 5-phosphate syntha...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410] == * common_name: ** beta-Alanine metabolism * Synonym(s): == Reaction(s) found ==...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/DXPS DXPS] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** beta-Alanine metabolism
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* common name:
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** 1-deoxy-D-xylulose 5-phosphate synthase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''91''' reactions in the full pathway
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** 1.0 [[pyr]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[g3p]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[dxyl5p]][c]
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* [[ABTA]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 Pyruvate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Glyceraldehyde 3-phosphate[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 1-deoxy-D-xylulose 5-phosphate[c]
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*** [[B471_RS0110025]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-cljungdahlii]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-bsubtilis]]
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* [[B471_RS0101820]]
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* [[ABUTD]]
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** [[pantograph]]-[[bsubtilis]]
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** 2 associated gene(s):
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** [[pantograph]]-[[aferrooxidans]]
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*** [[B471_RS0119455]]
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== Pathways  ==
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*** [[B471_RS0115620]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** 1 reconstruction source(s) associated:
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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*** [[orthology-bsubtilis]]
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* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
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* [[ALDD2x]]
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** '''8''' reactions found over '''24''' reactions in the full pathway
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** 2 associated gene(s):
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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*** [[B471_RS0115620]]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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*** [[B471_RS0119455]]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** 1 reconstruction source(s) associated:
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** '''148''' reactions found over '''694''' reactions in the full pathway
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*** [[orthology-bsubtilis]]
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* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
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* [[ASP1DC]]
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** '''16''' reactions found over '''67''' reactions in the full pathway
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** 1 associated gene(s):
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== Reconstruction information  ==
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*** [[B471_RS0116125]]
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* Category: [[orthology]]
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** 2 reconstruction source(s) associated:
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** Source: [[orthology-bsubtilis]]
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*** [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
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*** [[orthology-aferrooxidans]]
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** Source: [[orthology-aferrooxidans]]
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* [[DURAD]]
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*** Tool: [[pantograph]]
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** 1 associated gene(s):
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*** [[B471_RS0103590]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
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* [[ECOAH9ir]]
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** 2 associated gene(s):
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*** [[B471_RS0115580]]
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*** [[B471_RS0110785]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[PANTS]]
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** 1 associated gene(s):
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*** [[B471_RS0101070]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[SPMS]]
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** 1 associated gene(s):
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*** [[B471_RS0113665]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[SPRMS]]
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** 1 associated gene(s):
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*** [[B471_RS0113665]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
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== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/34DHPLACOX_NADP 34DHPLACOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/34DHXMANDACOX 34DHXMANDACOX]
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* [http://bigg.ucsd.edu/universal/reactions/34DHXMANDACOX_NADP 34DHXMANDACOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/3HBCOAHL 3HBCOAHL]
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* [http://bigg.ucsd.edu/universal/reactions/3HBCOAHLm 3HBCOAHLm]
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* [http://bigg.ucsd.edu/universal/reactions/3HPPD 3HPPD]
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* [http://bigg.ucsd.edu/universal/reactions/3M4HDXPAC 3M4HDXPAC]
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* [http://bigg.ucsd.edu/universal/reactions/3MOX4HOXPGALDOX 3MOX4HOXPGALDOX]
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* [http://bigg.ucsd.edu/universal/reactions/3MOX4HOXPGALDOX_NADP 3MOX4HOXPGALDOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/4ABUTD 4ABUTD]
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* [http://bigg.ucsd.edu/universal/reactions/4HOXPACDOX_NADP 4HOXPACDOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/56DH5FLURAAMH 56DH5FLURAAMH]
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* [http://bigg.ucsd.edu/universal/reactions/5FLURAOR 5FLURAOR]
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* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOX 5HOXINDACTOX]
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* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOXm 5HOXINDACTOXm]
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* [http://bigg.ucsd.edu/universal/reactions/AABHH AABHH]
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* [http://bigg.ucsd.edu/universal/reactions/ABOR ABOR]
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* [http://bigg.ucsd.edu/universal/reactions/ABTArm ABTArm]
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* [http://bigg.ucsd.edu/universal/reactions/ABUTDm ABUTDm]
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* [http://bigg.ucsd.edu/universal/reactions/AFLBURPPAAMH AFLBURPPAAMH]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD19x_P ALDD19x_P]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD19xr ALDD19xr]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20x ALDD20x]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20xm ALDD20xm]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20y ALDD20y]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20ym ALDD20ym]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD22x ALDD22x]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD2xm ALDD2xm]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD2y ALDD2y]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD2ym ALDD2ym]
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* [http://bigg.ucsd.edu/universal/reactions/ALDH ALDH]
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* [http://bigg.ucsd.edu/universal/reactions/AMPTASECG AMPTASECG]
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* [http://bigg.ucsd.edu/universal/reactions/AMPTASECGe AMPTASECGe]
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* [http://bigg.ucsd.edu/universal/reactions/APAPTm APAPTm]
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* [http://bigg.ucsd.edu/universal/reactions/APAT2rm APAT2rm]
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* [http://bigg.ucsd.edu/universal/reactions/APATr APATr]
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* [http://bigg.ucsd.edu/universal/reactions/APCS APCS]
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* [http://bigg.ucsd.edu/universal/reactions/ARGDh ARGDh]
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* [http://bigg.ucsd.edu/universal/reactions/ASAPT ASAPT]
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* [http://bigg.ucsd.edu/universal/reactions/BADP BADP]
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* [http://bigg.ucsd.edu/universal/reactions/BUPN BUPN]
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* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLm C2M26DCOAHLm]
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* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLx C2M26DCOAHLx]
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* [http://bigg.ucsd.edu/universal/reactions/DHACOAH DHACOAH]
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* [http://bigg.ucsd.edu/universal/reactions/DHPD DHPD]
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* [http://bigg.ucsd.edu/universal/reactions/DHPM1 DHPM1]
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* [http://bigg.ucsd.edu/universal/reactions/DHPM2 DHPM2]
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* [http://bigg.ucsd.edu/universal/reactions/DURAD2 DURAD2]
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* [http://bigg.ucsd.edu/universal/reactions/DURADx DURADx]
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* [http://bigg.ucsd.edu/universal/reactions/ECH_3hivcoa ECH_3hivcoa]
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH11p ECOAH11p]
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH12 ECOAH12]
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH12m ECOAH12m]
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH9m ECOAH9m]
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* [http://bigg.ucsd.edu/universal/reactions/GLACO GLACO]
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* [http://bigg.ucsd.edu/universal/reactions/GLACOm GLACOm]
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* [http://bigg.ucsd.edu/universal/reactions/GLUDC GLUDC]
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* [http://bigg.ucsd.edu/universal/reactions/GLYALDDr GLYALDDr]
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* [http://bigg.ucsd.edu/universal/reactions/HIBH HIBH]
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* [http://bigg.ucsd.edu/universal/reactions/IMACTD IMACTD]
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* [http://bigg.ucsd.edu/universal/reactions/IMACTD_m IMACTD_m]
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* [http://bigg.ucsd.edu/universal/reactions/LALGP LALGP]
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* [http://bigg.ucsd.edu/universal/reactions/MCD MCD]
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* [http://bigg.ucsd.edu/universal/reactions/MCDC MCDC]
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* [http://bigg.ucsd.edu/universal/reactions/MCDm MCDm]
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* [http://bigg.ucsd.edu/universal/reactions/MCDp MCDp]
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* [http://bigg.ucsd.edu/universal/reactions/MMCD MMCD]
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* [http://bigg.ucsd.edu/universal/reactions/MMCDm MMCDm]
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* [http://bigg.ucsd.edu/universal/reactions/MMCDp MMCDp]
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* [http://bigg.ucsd.edu/universal/reactions/MMSAD3 MMSAD3]
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* [http://bigg.ucsd.edu/universal/reactions/MMSAD3m MMSAD3m]
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* [http://bigg.ucsd.edu/universal/reactions/NABTNO NABTNO]
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* [http://bigg.ucsd.edu/universal/reactions/NABTNOm NABTNOm]
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* [http://bigg.ucsd.edu/universal/reactions/PBAL PBAL]
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* [http://bigg.ucsd.edu/universal/reactions/PBALm PBALm]
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* [http://bigg.ucsd.edu/universal/reactions/POLYAO2 POLYAO2]
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* [http://bigg.ucsd.edu/universal/reactions/POLYAO3 POLYAO3]
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* [http://bigg.ucsd.edu/universal/reactions/PYLALDOX PYLALDOX]
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* [http://bigg.ucsd.edu/universal/reactions/PYLALDOXm PYLALDOXm]
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* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLm T2M26DCOAHLm]
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* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLx T2M26DCOAHLx]
 +
* [http://bigg.ucsd.edu/universal/reactions/UPPN UPPN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common_name=beta-Alanine metabolism}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12605 12605]
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{{#set: reaction found=9}}
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* EC Number : 2.2.1.7
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{{#set: total reaction=91}}
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* MetaNetX (MNX) Equation : MNXR97831
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{{#set: completion rate=10.0}}
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* KEGG Reaction : R05636
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* BioCyc : META:DXS-RXN
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−
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=1-deoxy-D-xylulose 5-phosphate synthase}}
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{{#set: gene associated=B471_RS0101820}}
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−
{{#set: in pathway=map01100|map00730|map01110|map01130|map00900}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}}
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−
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 15:15, 21 March 2018

Pathway map00410

  • common_name:
    • beta-Alanine metabolism
  • Synonym(s):

Reaction(s) found

9 reactions found over 91 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Map00410&oldid=6441"